Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00446 ATGCTGAAGGGAACAACAAAAGGAGGTGAAATGGGAGGAGAAGGAGGGAGAGAAGGGGATTGGGAGTGCAGCAGTTGCAACAACAGGAACTACGCCTTCAGATCATTCTGCAACCGATGCAAGCAACCCCGCCTCCTCGTCGACACCAAAACCCCCTCTGATTCCAAGTGGCTCCCTCGTATTGGCGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAGTGCGGACAACCAAAGGAGGTAGCAGCCATGCCAGCAATTGCGATGACCGGAGCATCTTTCCCCCCTTATTCACACTATTTTTCCAGGGCCCCAGGAGGACCAGAACAAAAGATGAATATTGGATTGCTTGGCAATAGTGCACCGTCGCAGTCACTGCATTTTAACTCCAATTGGCCTGTTCCCAGAGCAGATAAGTATGGTGTCCAGCCACTTTCCATATGGCTACCAAGCAGAAATTATGGCTCTGGACATCCTCATGAAAATTCTACCAACCATAACCTGTCTGTTCCAAAGGGATGGCGCAATGGGGACTGGATCTGTAACTGTGGCTTCCACAATTACTCATCCCGCTCTCAGTGTAAAAAATGCAATGCTTTTCCACCTGCACTTGGGACAAAGCGGTTAGCTTCTGAAGAGTTGGTTTATGACTGGGATAACAAGAGATTGAATGTAGGAACTACAAATGATCAGCAGCAAACATATACAAGTTTAGATCTAGTGGTAGGGACCGGTGCAGATCCAAAACCTGGAGTCTTCCCCTCTTATCCCAGCATGAACTCAAGTACAGCTCCAAGTTTGCCATTGGCCACATTGCTTCCACCTCAAGTTTCTACACCTGCTCTCATTGGAAAAGGAGCAAAGCAATGGCGTAGTGGAGATTGGATGTGCTCAAATTGCAACAATCATAATTATGCTTCAAGACTACAGTGTAACAGGTGCAAAACTCAAAGGATGGCCCCCATGCAACCTGTTAACGTTGTGTAG 1011 0.4728 MLKGTTKGGEMGGEGGREGDWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPSDSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGASFPPYSHYFSRAPGGPEQKMNIGLLGNSAPSQSLHFNSNWPVPRADKYGVQPLSIWLPSRNYGSGHPHENSTNHNLSVPKGWRNGDWICNCGFHNYSSRSQCKKCNAFPPALGTKRLASEELVYDWDNKRLNVGTTNDQQQTYTSLDLVVGTGADPKPGVFPSYPSMNSSTAPSLPLATLLPPQVSTPALIGKGAKQWRSGDWMCSNCNNHNYASRLQCNRCKTQRMAPMQPVNVV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00446 336 Pfam Zn-finger in Ran binding protein and others 299 326 IPR001876 -
Gma02g00446 336 Pfam Zn-finger in Ran binding protein and others 17 44 IPR001876 -
Gma02g00446 336 Pfam Zn-finger in Ran binding protein and others 60 88 IPR001876 -
Gma02g00446 336 SUPERFAMILY Ran binding protein zinc finger-like 15 45 IPR036443 -
Gma02g00446 336 MobiDBLite consensus disorder prediction 1 20 - -
Gma02g00446 336 SUPERFAMILY Ran binding protein zinc finger-like 53 88 IPR036443 -
Gma02g00446 336 ProSiteProfiles Zinc finger RanBP2 type profile. 17 46 IPR001876 -
Gma02g00446 336 ProSitePatterns Zinc finger RanBP2-type signature. 303 322 IPR001876 -
Gma02g00446 336 PANTHER ZINC FINGER PROTEIN 283 335 - -
Gma02g00446 336 PANTHER ZINC FINGER PROTEIN 13 147 - -
Gma02g00446 336 PANTHER ZINC FINGER PROTEIN 180 243 - -
Gma02g00446 336 ProSitePatterns Zinc finger RanBP2-type signature. 21 40 IPR001876 -
Gma02g00446 336 ProSiteProfiles Zinc finger RanBP2 type profile. 299 328 IPR001876 -
Gma02g00446 336 PANTHER OS04G0110600 PROTEIN 283 335 - -
Gma02g00446 336 PANTHER OS04G0110600 PROTEIN 180 243 - -
Gma02g00446 336 PANTHER OS04G0110600 PROTEIN 13 147 - -
Gma02g00446 336 SMART zf_4 19 43 IPR001876 -
Gma02g00446 336 SMART zf_4 62 86 IPR001876 -
Gma02g00446 336 SMART zf_4 185 208 IPR001876 -
Gma02g00446 336 SMART zf_4 301 325 IPR001876 -
Gma02g00446 336 SUPERFAMILY Ran binding protein zinc finger-like 293 328 IPR036443 -
Gma02g00446 336 SUPERFAMILY Ran binding protein zinc finger-like 180 208 IPR036443 -
Gma02g00446 336 ProSitePatterns Zinc finger RanBP2-type signature. 64 83 IPR001876 -
Gma02g00446 336 ProSiteProfiles Zinc finger RanBP2 type profile. 60 89 IPR001876 -
Gma02g00446 336 Gene3D - 178 211 - -
Gma02g00446 336 Gene3D - 53 89 - -
Gma02g00446 336 Gene3D - 294 329 - -
Gma02g00446 336 Gene3D - 16 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00446 Gma-Chr2 4504834 4507604 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00446 - - gmx:100784874 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00446 02 4504834 4507604 Gma02g00446 02 4504834 4507604 ECH