Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00385 ATGCACCATCAATGCGCCATGAGAAACAGCTTCAAGAAGACCATGTTCGGGGCTCGTTCTTCTCTGAGGGTTTTTATATCAAGTACCATCTACTCACATCATTCACGTAAAATTTGTAGCTTTTCGCAGGACCATGATCCGGGTTCGTGGGAATCAATGGAGGGTCTTCTTCGTTGCCCTGCGAATTTCGTTCCTCTGTCTCCCATCAGCTTCCTAGAGAGAGCAGCGAAGGTTTGCAGAGACAGAACCTCGCTTGTGTATGGTTCTTTGGAGTATAACTGGGGTGAGACCCATCAACGGTGCTTGAAACTCGCTTCTGCTATTACCCACTTGGGGATTTCACGTGGGGATGTGGTTGCCACCCTATCACCTAATGTCCCTGCCATGTATGAGCTACATTTTGCTGTCCCAATGGCTGGAGCCATTCTTTGCACCCTTAACTCACGCTTAGATGCGGCTATAGTTTCAGTCCTTCTTGAGCATTCACAAGCCAAGGTCCTTTTTGTAGACTATCAACTACTTGAAATTGCACGAGGAGCATTGGACCTGTTAGGCAAAAAAGCTAGAGAATTGCCAATTTTAGTTCTAATTGCCGACAATGATTGCACATCTCACATTGACATTACTTCAGTTAGTTATGAGTATGAAAGGCTACTGGCTGATGGGCATAATGGTTTTGACATAGTGAGACCCCATTGCGAATTGGATCCTATAAGTATAAATTACACCTCTGGTACCACATCTAGGCCTAAAGGAGTAGTCTTCAGTCACAGGGGTGCTTATCTTAACTCTCTAGCAACGGTTTTGCTCTTTAGAATGGATCTTTTTCCTGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAACGGGTGGTGCCTCCCTTGGGGAGTGGCATCACAATTTGGGACCAATGTTTGTGTTAGGAAGGTCACTCCAAAGAACATTTTTGACAATATAGCTCAGCATAAGGTGACACACATGGCAGGAGCACCAACAGTGCTTAACATGATTGTGAACTCTGCATTGACTGATCGAAAGCCACTCAATCACAAGGTGGAGGTGATGACAGGAGGTTCGCCTCCGCCACCACAAATTCTTGCCAAGATGGAGGAGATTGGCTTTAACATCTCTCACCTTTATGGCCTCACAGAAACATATGGTCCAGGAACTTTCTGTGCATGGAGACCTGAGTGGGACTTGTTGCCCCATGAAGAGAGATCAAAGATGAAAGCAAGGCAAGGGGTGCCCCATGTGGCTTTGGAGGAAATTGATGTGAAAGATCCTTCCACAATGGAAAGTGTTCCATCTGATGGCAAAACAATGGGGGAGGTAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTGAGAGATTTGAAAGCAACAAAAGAAGCTTTCAAAGATGGGTGGTTTCATAGTGGGGATCTAGCTGTGAAACATTCTGATGGTTACATAGAAATCAAGGACAGGTTGAAGGACATAGTAGTCTCCGGGGGAGAGAATATTAGCTCGGTTGAGGTAGAAACAGTTTTGTATAGCCATCCAGCGGTTCTCGAAGCTGCAGTTGTTGCAAAGCCTGATGATCATTGGGGCCAAACTCCTTGTGCTTTTGTGAAGTTGAAAGAGGGGTTTGATTTAGATGCTCTAGAAATAATCAACTTTTGCAGGGACCATTTGCCCCATTACATGGCTCCTAAAACTGTCATTTTTCAAGATATGCCAAAAACTTCAACAGGGAAGATACAGAAGTTTGTTCTAAGGGAGAAAGCCAAGGCTTTTAGAGGCAACCAAGCATAA 1797 0.4457 MHHQCAMRNSFKKTMFGARSSLRVFISSTIYSHHSRKICSFSQDHDPGSWESMEGLLRCPANFVPLSPISFLERAAKVCRDRTSLVYGSLEYNWGETHQRCLKLASAITHLGISRGDVVATLSPNVPAMYELHFAVPMAGAILCTLNSRLDAAIVSVLLEHSQAKVLFVDYQLLEIARGALDLLGKKARELPILVLIADNDCTSHIDITSVSYEYERLLADGHNGFDIVRPHCELDPISINYTSGTTSRPKGVVFSHRGAYLNSLATVLLFRMDLFPVYLWNVPMFHCNGWCLPWGVASQFGTNVCVRKVTPKNIFDNIAQHKVTHMAGAPTVLNMIVNSALTDRKPLNHKVEVMTGGSPPPPQILAKMEEIGFNISHLYGLTETYGPGTFCAWRPEWDLLPHEERSKMKARQGVPHVALEEIDVKDPSTMESVPSDGKTMGEVMFRGNTVMSGYLRDLKATKEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIVVSGGENISSVEVETVLYSHPAVLEAAVVAKPDDHWGQTPCAFVKLKEGFDLDALEIINFCRDHLPHYMAPKTVIFQDMPKTSTGKIQKFVLREKAKAFRGNQA 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00385 598 ProSitePatterns Putative AMP-binding domain signature. 240 251 IPR020845 -
Gma02g00385 598 PANTHER ACYL-ACTIVATING ENZYME 32 593 - -
Gma02g00385 598 Pfam AMP-binding enzyme C-terminal domain 506 580 IPR025110 -
Gma02g00385 598 Gene3D - 492 594 IPR045851 -
Gma02g00385 598 SUPERFAMILY Acetyl-CoA synthetase-like 50 591 - -
Gma02g00385 598 CDD ttLC_FACS_AEE21_like 63 588 - -
Gma02g00385 598 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 32 593 - -
Gma02g00385 598 Pfam AMP-binding enzyme 73 497 IPR000873 -
Gma02g00385 598 Gene3D - 59 491 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00385 Gma-Chr2 4015364 4019775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00385 129 593 Miscellaneous Gene Families AT1G20560 64.026 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00385 - - gmx:100500429 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00385 02 4015364 4019775 Gma02g00385 02 4015364 4019775 ECH
Gma11g00764 11 6383539 6393564 Gma02g00385 02 4015364 4019775 PCT
Gma02g00385 02 4015364 4019775 Gma11g00764 11 6383539 6393564 PCT