Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00334 ATGAAGAGGAGCAGAAGCTTTTCCTTACTCTTTTACCTGTACTTGTTGGTGATTGTCTTTGCCACCTTCTCTATAGTTTCCATGGAAGCAAGGAAGACTAACATCAAGAAAAAACTTCACAAACGTCACAAAGGTGGTCACACTCGAGGGTCACATTCTCCATGTCCAGTTCCAGCCCCTCAAGGGAGTACCTTTGATGTTTTGGCTTTTGGCGCCAAGGGAAATGGAGTTTCTGATGATTCAGAGGCACTTCTAGCTGCATGGAATGGTGCATGTAAAGTTGCTGCTGCTACAGTTAAAATTCCAGCACAATTCAAGTTCCTCATGAAACCTGTTACTTTACAAGGCCCTTGTATGCCCGATCTTACTCTTCAGATAGATGGAACTCTATTGGCACCTTCTGAAGCATCTTCCTGGCCACAATCTAGTCTGTTTCAGTGGATAAATTTCAAGTGGGTGCAGAACTTCACCATCATAGGTTCTGGCACTGTTGATGGCCAAGGCTATAATTGGTGGAGCTCCTCAGAATTTTATGACATGCAGAAGACCTACTCCAAACATATTCCTAGCATTAAACCAACCGCTATAAGATTCTACTCTAGCAACTTTGTAACAGTTCGTGATATCAGAATCATAAACAGTCCTCTTTGCCATCTAAAATTTGACAACTCAAAGGGGATTAAAGTTAACAACATTACAATATCCTCCCCCGAGAATAGCCCCAACACTGATGGCATTCACTTACAAAACACACAGGACGTAGAAATTCAACGTTCTATCATTTCAACAGGAGATGACTGTGTATCCATCCAAACTGGTTGCTCTAATGTTCATGTCCACCACATTAATTGTGGACCTGGACATGGTATAAGTTTGGGAGGATTAGGAAAAGACAAGACTAGTGCGGCATGTGTGTCTGACATCACTGTTGAGGATATCTCAATGAAAAACACTCTATTTGGAGCAAGGATCAAAACATGGCAGGGAGGCATTGGCATGGTTAAAAATGTGACATTTTCCAGAATTCAAGTCTATGATGTCATGTACCCAATAATGATAGACCAATACTATTGTGACAAGGAAATCTGCAAGAACCACACAAGCACTGTGGTGATTTCTGGGGTTAAGTTTGATCAAATACATGGAACTTATGGCATGCAGCCTGTGCATCTAGCTTGCAGCAATTCCATACCATGCACAGATGTTGATTTGAGCGATATTCAACTGAGTCCCTCCCCTAAGTATAGAGGTTTGCAACAAGCTGTGTGCTGGAACTCCTATGGAAAATCACAAGGTCCTTTGATACCTTCAAGCATTGATTATTGCTTGAGAAGTGGTGGTGGATTAATCAAGAGGATAGCAAGGTCACATGATAGAGTGTGTTACTAA 1389 0.4176 MKRSRSFSLLFYLYLLVIVFATFSIVSMEARKTNIKKKLHKRHKGGHTRGSHSPCPVPAPQGSTFDVLAFGAKGNGVSDDSEALLAAWNGACKVAAATVKIPAQFKFLMKPVTLQGPCMPDLTLQIDGTLLAPSEASSWPQSSLFQWINFKWVQNFTIIGSGTVDGQGYNWWSSSEFYDMQKTYSKHIPSIKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPNTDGIHLQNTQDVEIQRSIISTGDDCVSIQTGCSNVHVHHINCGPGHGISLGGLGKDKTSAACVSDITVEDISMKNTLFGARIKTWQGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKEICKNHTSTVVISGVKFDQIHGTYGMQPVHLACSNSIPCTDVDLSDIQLSPSPKYRGLQQAVCWNSYGKSQGPLIPSSIDYCLRSGGGLIKRIARSHDRVCY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00334 462 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 16 450 - -
Gma02g00334 462 PANTHER - 16 450 - -
Gma02g00334 462 MobiDBLite consensus disorder prediction 37 56 - -
Gma02g00334 462 Gene3D - 57 440 IPR012334 -
Gma02g00334 462 Pfam Glycosyl hydrolases family 28 94 416 IPR000743 GO:0004650|GO:0005975
Gma02g00334 462 SUPERFAMILY Pectin lyase-like 57 439 IPR011050 -
Gma02g00334 462 SMART pbh1 274 294 IPR006626 -
Gma02g00334 462 SMART pbh1 224 250 IPR006626 -
Gma02g00334 462 SMART pbh1 251 272 IPR006626 -
Gma02g00334 462 SMART pbh1 334 355 IPR006626 -
Gma02g00334 462 SMART pbh1 305 326 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00334 Gma-Chr2 3484987 3488073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00334 1 461 Glycoside Hydrolase AT3G26610 61.996 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00334 K01213 - gmx:100802722 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00334 02 3484987 3488073 Gma02g00334 02 3484987 3488073 ECH