Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00212 ATGGAAGAACCGAACAAGACAGAGAACGAAGATGACAGGGACGAATCAGAACAACGAGTGTGGAGTTGGGGTGCTGGAACCGAGGGACAGTTAGGAACAAAGATTCTTCAGGATGAGCACTTCCCTCAACTCCTTCACCAATTCTCTCTCTCCTCCATCTCTTCCCTTGCCTGTGGCGGTGCTCATGTCATAGCCTTAACCTCTGCTGGAAAGGCACTATCATGGGGTAGGGGCAATTCTGGCCAACTGGGCCATGGGGAGGTTGTGAGTAACACTTTGTATCCAAAGGCTGTAACATCATTGGATGGCTATTTCATAACCCATGTCTCTGCTGGGTGGAGCCACTCTGGTTTTGTTTCAGATACTGGGTTTGTGTTCACTTGTGGGGATGGCTCCTTTGGTCAACTGGGGCATGGGGATAATGCCTCACACTGCTCTCCTGTCAAAGTGTCATGCTTTGTTGATCTGCATGTGGCACAGGTGGCATGTGGAATGCGCCATTCCCTTGTCTTGTTAAAAGATTGCTCAGGAAATCAAGTTTATGGATTTGGCTCTGGGAAGCGTGGTCAACTGGGTGTCAGCAACGATAGGGTCAAATCTGTTAATGTTCCTAAAGTTGTTAGTGGCTTTGAAGGTGTTGAAATCGTTGGAACTGCTGCCAATGGTGACCATAGTGCTGCAGTATCTGTTGATGGACATGTTTACACATGGGGAAGAGGCTTCAAGGGCTTTGAAGATGCTCATGTTCCTCAGTGCTTAAACTCTTCATTGAATTTTACCAAAGTTGCTCTGGGATGGAACCATGCTTTAGCTATGAGTGGTGAAGGGGAGGTTTATATGCTAGGTGGAAACCACCTTGGAGTGCTTAGTGATCTTCAGAATATAGGCCCTGCTAAGCATTTTCCTGTAGATTTAAGAGAATTCAATTTGGAGAAAGTCCCTGGCCTTGATGGGACGAAGATTACTGATATTGCTGCCGGAGCTGAGCATTCTGTCATTGTCACAGAGCATGGAGAAATAAAGACATGGGGTTGGGGTGAGCATGGTCAACTTGGTTTAGGGGATACTCGCGACCAAACCAGTCCTGTTACAGTAAGTCTCGATTATGATCTGAATGAAGCTGCATCAATTAGAGTTTTCTGTGGAAGTGGGTTCACGTTTGCTGTAACCATGCCCTAG 1179 0.4682 MEEPNKTENEDDRDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKDCSGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPVDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVTMP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00212 392 MobiDBLite consensus disorder prediction 1 20 - -
Gma02g00212 392 Pfam Regulator of chromosome condensation (RCC1) repeat 179 228 IPR000408 -
Gma02g00212 392 Pfam Regulator of chromosome condensation (RCC1) repeat 19 66 IPR000408 -
Gma02g00212 392 Pfam Regulator of chromosome condensation (RCC1) repeat 70 118 IPR000408 -
Gma02g00212 392 Pfam Regulator of chromosome condensation (RCC1) repeat 123 171 IPR000408 -
Gma02g00212 392 Pfam Regulator of chromosome condensation (RCC1) repeat 340 389 IPR000408 -
Gma02g00212 392 Gene3D - 7 244 IPR009091 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 276 337 IPR000408 -
Gma02g00212 392 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 161 171 IPR000408 -
Gma02g00212 392 PRINTS Chromosome condensation regulator RCC1 signature 19 35 IPR000408 -
Gma02g00212 392 PRINTS Chromosome condensation regulator RCC1 signature 53 66 IPR000408 -
Gma02g00212 392 PRINTS Chromosome condensation regulator RCC1 signature 72 88 IPR000408 -
Gma02g00212 392 PRINTS Chromosome condensation regulator RCC1 signature 265 283 IPR000408 -
Gma02g00212 392 PRINTS Chromosome condensation regulator RCC1 signature 333 354 IPR000408 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 123 174 IPR000408 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 18 69 IPR000408 -
Gma02g00212 392 SUPERFAMILY RCC1/BLIP-II 176 390 IPR009091 -
Gma02g00212 392 SUPERFAMILY RCC1/BLIP-II 18 195 IPR009091 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 338 392 IPR000408 -
Gma02g00212 392 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 20 386 - -
Gma02g00212 392 PANTHER OS01G0777800 PROTEIN 20 386 - -
Gma02g00212 392 Gene3D - 245 391 IPR009091 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 70 122 IPR000408 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 178 231 IPR000408 -
Gma02g00212 392 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 232 275 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00212 Gma-Chr2 2077624 2080759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00212 - - gmx:100814103 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00212 02 2077624 2080759 Gma02g00212 02 2077624 2080759 ECH