Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00078 ATGTCATCCAGAACTAGTGACATGGATGATTTTCCCAAGGGTTTGTGTGGGTGGAGTTGGAAGGAGAACAAGTTGTTTGAGCAGGCCTTAGCCGTGGTAGATGAGAACCACCCGGAACGGTGGGAGATTGTTGCAGCCATGGTTGGAGGACAAAAGAGTGCAGGGGATGTTCAAGAGCATTATGTGTTTCTTTTGGATGATTTAATGTTCATAGAATCTGGAAAATTGGACCATAAACTTGCGGTGAAAGAAGCTCACCTTGTGTCCTAA 270 0.4519 MSSRTSDMDDFPKGLCGWSWKENKLFEQALAVVDENHPERWEIVAAMVGGQKSAGDVQEHYVFLLDDLMFIESGKLDHKLAVKEAHLVS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00078 89 SUPERFAMILY Homeodomain-like 18 73 IPR009057 -
Gma02g00078 89 PANTHER PROTEIN RADIALIS-LIKE 3 8 83 - -
Gma02g00078 89 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 8 83 IPR044636 GO:0003700
Gma02g00078 89 Gene3D - 17 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00078 Gma-Chr2 861485 861754 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00078 - - var:108325196 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01364 10 40416370 40416615 Gma02g00078 02 861485 861754 GST
Gma19g02098 19 49843685 49843978 Gma02g00078 02 861485 861754 PCT
Gma03g02060 03 46158464 46158826 Gma02g00078 02 861485 861754 PCT
Gma02g00078 02 861485 861754 Gma19g02098 19 49843685 49843978 PCT
Gma02g00078 02 861485 861754 Gma03g02060 03 46158464 46158826 PCT