Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02271 ATGGGGAGAGTGGTTTTGGGGGTGGCGGTGACGGTGGCGGTGGCGACGTGCGCGTTGGCGGCGGTGGTGGTGGGGCGGAGAGTGAGGAGCCGGAGGAAGTGGAAGAAAGTGGCGAATGTGGTGAGGGAACTGGAGGAAGGGTGTGCCACTAGGGTTGGGAGGTTGAGGCAAGTGGTGGATGCCATGGCCGTGGAGATGCACGCTGGTTTGGCTTCTGAAGGTGGCTCCAAGCTCAAAATGCTTCTCACATTCGTCGATAATCTCCCTAATGGGACCGAGAGAGGAACATATTATGCACTTCATCTTGGGGGTACCAATTTTAGGGTTTTGCGGGTTCAATTAAATGGTCAACCATCTTCAGACTTTGAACATGAAGTAGAACGACAACCCATTCCCCAACATGTAATGACTAGCACAAGCGAGGATCTCTTTGATTTTATTGCGTCTTCATTGAAGGAATTCATTGCTAAAGAAGGAGATGGTTCCAATATTTCACAGGATAGAAGGGAGCTTGGATTTACATTCTCCTTTCCTGTGAAACAAATGTCTGTTTCTTCTGGCATTTTAATCAAATGGACAAAAGGGTTTTCCATCGGAAATATGGTAGGAAGAGATGTTGCAACATGTTTGCAAGAAGCATTGGCACGGAAAGGCCTAGATGTGCGGGTAGCTGCATTGGTTAATGACACTGTTGGAACATTAGCAGTTGGACATTATCATGATCCAGATACTGTTGCAGCAATTATAATTGGTACTGGTACAAATGCCTGCTATTTGGAACGAGTTGATGCTATTATCAAGTGTCAAGGCCTTCTTATGACATCCGGACGAATGGTTGTCAATATGGAATGGGGAAACTTTTGGTCATCTCACTTACCAAGAACATCATATGACATTGATTTGGATGCTGAGAGCCCTAATCCAAATGATCAGGGTTTTGAGAAAATGATATCAGGAATGTATCTTGGTGACATTGTGAGAAGAGTCATTCTTAAGATGTCATTAGAGTCGGATATGTTTGGACCAATTTCTCCCAAGCTTTCAATGCCTTTCATACTGTGGACTCCTTTGATGGCTGCCATGCATGAGGATAATTCTCCTGACTTGAGAGAAGTAGCAAGAATCCTTAATGACATATTTGAGATTCCTGATGTTCCCTTGAAGGCAAGAAAAATTGTGGTGAAGGTGTGTGATGTGGTGACTCGTAGAGCTGCTCGATTGGCAGCTGCTGGTATTGTTGGTATCTTGAAGAAGATTGGTAGGGACGGGAGTGGTGGTATCACAGGTGGACGGAGTAGAAGTGATATGAAAATGAGAAGAACAGTTGTGGCAATTGAAGGGGGATTGTATTCTAAATATACATTGTTTAGGGAGTACTTGCGTGAAGCTCTAAATGAAATATTGGGAGAAGATATTGCCAAGCACGTAATTCTAAAGGTCACCGAAGATGGATCCGGCATTGGGGCTGCACTGCTTGCTGCCTCTtattcatcctaa 1497 0.4456 MGRVVLGVAVTVAVATCALAAVVVGRRVRSRRKWKKVANVVRELEEGCATRVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPNGTERGTYYALHLGGTNFRVLRVQLNGQPSSDFEHEVERQPIPQHVMTSTSEDLFDFIASSLKEFIAKEGDGSNISQDRRELGFTFSFPVKQMSVSSGILIKWTKGFSIGNMVGRDVATCLQEALARKGLDVRVAALVNDTVGTLAVGHYHDPDTVAAIIIGTGTNACYLERVDAIIKCQGLLMTSGRMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILKMSLESDMFGPISPKLSMPFILWTPLMAAMHEDNSPDLREVARILNDIFEIPDVPLKARKIVVKVCDVVTRRAARLAAAGIVGILKKIGRDGSGGITGGRSRSDMKMRRTVVAIEGGLYSKYTLFREYLREALNEILGEDIAKHVILKVTEDGSGIGAALLAASYSS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02271 498 SUPERFAMILY Actin-like ATPase domain 24 241 IPR043129 -
Gma01g02271 498 Gene3D - 83 493 - -
Gma01g02271 498 PRINTS Hexokinase family signature 98 114 - -
Gma01g02271 498 PRINTS Hexokinase family signature 171 196 - -
Gma01g02271 498 PRINTS Hexokinase family signature 223 239 - -
Gma01g02271 498 PRINTS Hexokinase family signature 246 260 - -
Gma01g02271 498 PRINTS Hexokinase family signature 311 333 - -
Gma01g02271 498 PRINTS Hexokinase family signature 393 415 - -
Gma01g02271 498 CDD NBD_sugar-kinase_HSP70_actin 99 260 - -
Gma01g02271 498 Pfam Hexokinase 246 494 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gma01g02271 498 Pfam Hexokinase 41 239 IPR022672 GO:0005524|GO:0005975|GO:0016773
Gma01g02271 498 Gene3D - 61 482 - -
Gma01g02271 498 ProSiteProfiles Hexokinase domain profile. 35 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gma01g02271 498 SUPERFAMILY Actin-like ATPase domain 243 496 IPR043129 -
Gma01g02271 498 PANTHER HEXOKINASE 1 498 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gma01g02271 498 ProSitePatterns Hexokinase domain signature. 171 196 IPR019807 GO:0004396|GO:0005524|GO:0006096
Gma01g02271 498 PANTHER HEXOKINASE-3 1 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02271 Gma-Chr1 57854201 57859270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02271 K00844 - gmx:100776994 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02271 01 57854201 57859270 Gma11g00878 11 7365950 7369887 GST