Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02266 ATGAAACTGAAACATGAAGAATCATCATCGTCTTCTTGTTCATCTCCCATCAAATTCCAAATGTTAAGGCATCAATGCAATACCAGCATTTTTGGCCTCTCCTTCTCCTTCATATTCTCCCTATGGTGCCTCCTCTTCTTCTACATCAAGCTTCGCCTCGTTCATGGCACTGGAGCTATGTTAGAGCTCAATGAATCAGGTAGCTCCAACAACAGTCTTGGTCAGAAACTTGCAAAACCCTCCTACTCAATTCCTGAAACAACTAGTTTAGAACAAATGTTTTGGCACGTTTTAGGCAATGGTAGTAATTTGGTGTGCAAACTGCAGCCTCCACAAGACGTAAAGAAACTTAACCAGATTCCTGATGAGAAACTTCATCACAATTACGATGAATTTCGAGCGCAAGAAAAAACAAAGGGCATGAACTCTGCGCTTGTTAACATAACTCACAGGCTTGAATCTGATGGTTCTGTGTACAACTATGCCTCTGAGTCCAAAGGTGCAAAGGTGGTGGCCCATAATAAGGAGGCCAAAGGTGCAAAAAATATACTTGGGAAGGATCATGACAAGTACCTCAGAAACCCTTGTTCTGTTGAAGGAAAATTTGTTGTTATTGAGCTCTCAGAAGAGACCCTCGTTGATTCCGTGAAGATTGCAAACTTTGAGCATTATTCTTCCAACTTCAAGGAATTTGATTTGGCTGGAAGTTTGAACTATCCAACTGAAGAATGGAACATGCTGGGAAACTTCATTGCTGCCAATGTCAAGCATGCACAGATCTTTAAGCTGCCTGAACCCAAATGGGCAAGGTATTTAAAGTTGAGCTTGATTAGTCATTATGGATCCGAGTTTTACTGCACACTGAGTGTTGTGGAAGTTTATGGGATCAATGCAATAGAGCGGATGCTTAAGGATCTAATTGTTGCTTCTGTGGCATCCATTCCTGATAAGTTGCCTGTTCATAATATCACTGACACCTCTTCATTGAAATCAGAAGATGGTCAAATTGACAGAAATGGAAAAAAAGTTGATACTAAGAATGATACTGTGGCTGCTGAGATAACAAGCAATGATACTGCTCGGGAGTTTGACACAGAAGCGGTAAAAACAACAATGACTGCGAACTTGATTCCCGATCCTGTATTAGAACTTAGACAACAGCTAAATGGTAGGGTAGCTGGTGACACTGTTCTGAAGATTTTGATGCAGAAAGTGAAGTCAGTGGAGGTAAACTTATCTTCCCTTGAGGATTACATCAAAGAATTGAACAGCAGACAACGGGTTAAAATACCAGATCTTGAGAAAGAGTTGTCCAGATTATCAGAAAGCCTTGGACAAAGCAAATCAGAGATCAAAGATCTCTGGCAGTGGAACACAAATATGGAAAAAGGAATATCTGAGGTTGAGTCTTGGAAAGATGCTGTCTCATCTCAACTTAATGAAATAGCCAGAGAAAATAGCATGCTAAGATCAGATGTTCGAAAGGTTGCAAGTAATCAAGTAAATATGGAAACCAAAGAACTTGCTGTATTAGCAACGAGTCTTGTTTTTGTGTGCCTTGCAGTTCTCAAGATAGTTTCAGTACATATGTTGACGTTTTCTGCATCATACAATGCAGATAAGGCATTCTATAGTTAA 1638 0.4005 MKLKHEESSSSSCSSPIKFQMLRHQCNTSIFGLSFSFIFSLWCLLFFYIKLRLVHGTGAMLELNESGSSNNSLGQKLAKPSYSIPETTSLEQMFWHVLGNGSNLVCKLQPPQDVKKLNQIPDEKLHHNYDEFRAQEKTKGMNSALVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGAKNILGKDHDKYLRNPCSVEGKFVVIELSEETLVDSVKIANFEHYSSNFKEFDLAGSLNYPTEEWNMLGNFIAANVKHAQIFKLPEPKWARYLKLSLISHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVASIPDKLPVHNITDTSSLKSEDGQIDRNGKKVDTKNDTVAAEITSNDTAREFDTEAVKTTMTANLIPDPVLELRQQLNGRVAGDTVLKILMQKVKSVEVNLSSLEDYIKELNSRQRVKIPDLEKELSRLSESLGQSKSEIKDLWQWNTNMEKGISEVESWKDAVSSQLNEIARENSMLRSDVRKVASNQVNMETKELAVLATSLVFVCLAVLKIVSVHMLTFSASYNADKAFYS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02266 545 PANTHER MEMBRANE PROTEIN CH1 RELATED 57 539 IPR045120 GO:0016020
Gma01g02266 545 Gene3D - 171 306 - -
Gma01g02266 545 Coils Coil 405 425 - -
Gma01g02266 545 Pfam Sad1 / UNC-like C-terminal 173 295 IPR012919 -
Gma01g02266 545 Coils Coil 430 450 - -
Gma01g02266 545 SUPERFAMILY Galactose-binding domain-like 197 294 IPR008979 -
Gma01g02266 545 ProSiteProfiles SUN domain profile. 138 298 IPR012919 -
Gma01g02266 545 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 57 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02266 Gma-Chr1 57807538 57810174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02266 - - gmx:102668828 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02266 01 57807538 57810174 Gma01g02266 01 57807538 57810174 ECH
Gma01g02266 01 57807538 57810174 Gma11g00147 11 1165535 1168297 GST