Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02263 ATGTGCCCGTGGGCGTGGGTTATGTTTCACTTTGCCACATCAATCCATCCATCCTCACACTCCAACACCGAGCGAGCCATGGCGAAGCCCGAGAACCGCACTAACTTAGCTTCGTGTTTCGTGGCCACCGTTTTCTTGATCTTCCTTCTCATTGTGGTCTTCATCGTTTACTTCACTGTGTTCAAGCCGCAGTACCCCAAAATCGCCGTGAGCGCCATCCAGATCCCTTCCTTCTCCGCCACTAACGGCACCGTCAACTTCACCTTCTCCCAGTACGCCTCCGTTAGGAACCCTAACCGAGGCACCTTCTCCCACTACGACAGCTCGCTCCAGCTTCTCTACTACGGCAGACAGGTCGGCTTCATGTTCGTTCCGGCCGGAAAGATCGCCGCCGGCAGGACTCAGTACATGGCCGCCACCTTCACCGTTCAGTCCTTTCCCTTGGGCCTGGGGCCCACCTCCGTGGATGGGCCTAGTAGTGTGGGGCCCACGATGGAGATGGAGTCGAGGATAGAGATGGCGGGGCGCGTGAGAGTGTTACACCTTTTCAGTCATCACGTGGAGGCCAAAGCTCAATGCAGGGTCGCCATCGCCATCAACGATGGATCGGTGTTAGGTTTTCGGTGCTAA 630 0.5667 MCPWAWVMFHFATSIHPSSHSNTERAMAKPENRTNLASCFVATVFLIFLLIVVFIVYFTVFKPQYPKIAVSAIQIPSFSATNGTVNFTFSQYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIAAGRTQYMAATFTVQSFPLGLGPTSVDGPSSVGPTMEMESRIEMAGRVRVLHLFSHHVEAKAQCRVAIAINDGSVLGFRC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02263 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 28 209 - -
Gma01g02263 209 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 28 209 - -
Gma01g02263 209 SUPERFAMILY LEA14-like 46 147 - -
Gma01g02263 209 Pfam Late embryogenesis abundant protein 94 193 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02263 Gma-Chr1 57797927 57798729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02263 - - gmx:100820289 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02263 01 57797927 57798729 Gma01g02263 01 57797927 57798729 ECH
Gma01g02263 01 57797927 57798729 Gma11g00151 11 1174067 1174603 GST
Gma01g02263 01 57797927 57798729 Gma05g02118 05 42394976 42395737 PCT
Gma01g02263 01 57797927 57798729 Gma08g00224 08 1912207 1912836 PCT