Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02205 ATGGCTTCGGAGAAGATTTGCTCGATTCTCTTGTTTTGTGCTGTAATTTTGCTTCTCCGTGATGCTCCTTCTGCCATAGCTGGGGACATAGTTCACGACGACGATTCAACTCCCAAGAAGCCGGGTTGCGAGAACCAGTTCGTTCTGGTAAAAGTGCAAACATGGGTCAATGGTGTAGAGGATGTTGAATTTGTTGGTGTGGGTGCCAGATTTGGCAGAGCCATTGTGTCCAAAGAGAAAAATGCAAAGCACACGCGCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAAAAGGCAAATATTGCACAGAATGCTAATGCTTCAGCCATCCTCATCATAAATAACCAAAAAGAACTGTACAAGATGGTTTGCGAACCTGATGAAACTGATTTGAACATACACATACCTGCTGTCATGCTTCCACTAGATGCAGGTACAAGGCTGGAAAAAATGCTGACAACTACTTCATCTGTGTCTGTGCAGCTGTACTCGCCACTTCGACCAGCTGTTGACGTAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCTTGGACGACCCGAGAAGCAGCTATTGAACAGGATAAGTTGCTAAAGGATGCTTCAGATGAACTCCCAAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAATATGAATGTGAAAGCTGCAGTCCTTTTTGTTGTATTTGCTTCGTGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGATGTTTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAGCATGCCGGAGAGTCATACATCAAAGTACCTTTCTTAGGAGCTATCTCATACCTGACTTTGGCTGTTTCTCCATTCTGTATAACATTTTCCATTCTCTGGGCAGTTTATCGCAACGAATCCTTTGCCTGGATTGGTCAAGATATACTTGGAATAACACTGATAATCACAGTTCTACAGATTGTACATGTACCAAATCTCAAGGTTGGTACAGTACTTCTTGGCTGTGCCTTCATTTACGACATCTTTTGGGTATTTGTCTCAAAGAAGTTTTTCAAGGAAAGCGTCATGATTGTGGTGGCCCGAGGCGATCGAAGTGGAGAAGATGGAATTCCCATGTTACTGAAGTTCCCTCGGATTTTTGATCCATGGGGTGGTTACAGCATCATAGGTTTTGGAGACATCCTTTTACCAGGAATGCTGGTGGCATTCTCACTCAGGTACGATTGGCTGGCAAACAAGAGCCTTAGAAGTGGATATTTCTTGTGGGCAATGTTTGCATATGGCTTTGGTCTTTTAGTTACGTACGTGGCACTAAACTTGATGGACGGGCATGGCCAACCAGCACTACTATACATCGTTCCATTTACCCTTGGGACCCTGATGACATTGGGGCGGAAGCGAGGAGATTTGAGGGTTTTGTGGACTAGTGGAGAACCTGAAAGACCCTGTCCACATATAAGACTCCTACACAGTGGAGAACTAAACTGTGAATGA 1632 0.4381 MASEKICSILLFCAVILLLRDAPSAIAGDIVHDDDSTPKKPGCENQFVLVKVQTWVNGVEDVEFVGVGARFGRAIVSKEKNAKHTRLILSDPRDCCIPPKNKIVGDVIMVDRGNCTFTKKANIAQNANASAILIINNQKELYKMVCEPDETDLNIHIPAVMLPLDAGTRLEKMLTTTSSVSVQLYSPLRPAVDVAEVFLWMMAVLTILCASYWSAWTTREAAIEQDKLLKDASDELPNTKYASVSGVVNMNVKAAVLFVVFASCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVALLSRWFKHAGESYIKVPFLGAISYLTLAVSPFCITFSILWAVYRNESFAWIGQDILGITLIITVLQIVHVPNLKVGTVLLGCAFIYDIFWVFVSKKFFKESVMIVVARGDRSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKSLRSGYFLWAMFAYGFGLLVTYVALNLMDGHGQPALLYIVPFTLGTLMTLGRKRGDLRVLWTSGEPERPCPHIRLLHSGELNCE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02205 543 Gene3D - 25 187 - -
Gma01g02205 543 SUPERFAMILY PA domain 103 178 IPR046450 -
Gma01g02205 543 Pfam PA domain 96 170 IPR003137 -
Gma01g02205 543 Pfam Signal peptide peptidase 247 524 IPR007369 GO:0004190|GO:0016021
Gma01g02205 543 PANTHER SIGNAL PEPTIDE PEPTIDASE 9 540 IPR007369 GO:0004190|GO:0016021
Gma01g02205 543 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 9 540 - -
Gma01g02205 543 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02205 Gma-Chr1 57279881 57286397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02205 K09597 - gmx:100796300 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02205 01 57279881 57286397 Gma01g02205 01 57279881 57286397 ECH
Gma01g02205 01 57279881 57286397 Gma11g00212 11 1684141 1689841 GST