Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02200 ATGGGATCCCTTGATCTGAAATGGAACTCATCGGGATGCATGGTTTTGAGAAAGGTAGAGTCAACTAAAACTAAAGGGGAAGATATGTCTTCCCTGTGTGGTAGTTCAGCCTATCTGTACAAAAGGAGAGGAAGAAGAATAAGATGCAGAGAACAAAGAGTAAATATTGTTGCTACGGGGCCAGCCATAGATCATGCTCCTGTTATTGCCAAGCCCTTGACTAAAGATGATCTAATTGACTACTTCGTATCTGGTTGCAAGCCCAAACATAACTGGAGAATAGGTACAGAGCACGAGAAGTTTGGTTTTGAGCTTAAAACTTTACGTCCGATTAATTACAAACAAATATCAGCTTTACTCAATCGCATAGCTACAAGATTTGATTGGGAAAAAATAATGGAAGGTGACAACATCATAGGACTCAAAAATGGCAAGCAAAGCATATCATTAGAACCTGGTGGTCAATTTGAGCTTAGTGGTATGCCTTTGAAAACATTGCATCAAACTTGTGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGATTAGGTTTTCAGCCTAAATGGAGACTGGAAGACATACCTGGAGTGCCTAAGGTACGATATAACATCATGCAAAATCACTTGGGTAAATTTGGCTCACCTACAATTGAATCATTGTTCATGACATGCTCAGTTCAGGTCAACCTGGACTTCAGTTCTGAAGCAGACATGATCAAGAAAATGCGTGCCAGTATTGCTTTGCAGCCTTTGGCAGCAGCCTTATTCGCTAATTCACCTTTCAAGGAAGGGGTTCCAAATGGTTATCTCACCATAAGAAGCCATAGGGTGGGTCAGATGGACAAAAGTCGCGCTGGCATACTCCCCTTTGTTTTTTATGACACTTTCGGGTTTGAGAAGTATGTTGATTACGCTCTTGATGTGCCAATGTTGTTTGTTTATCGAAAAAACAAGTACATTGACTGCCGGGGCATGTCATTCAGGGACTTCATGGCAGGTAAACTCCCTGTCATTCCTGGTCAGGTGCCAACGCTTGGTGACTGGGAAAATCATCTAACAACTATATTTCCTGAGGTCAGGCTAAAGAGGTACATGGAAATGAGGGGTGCTGATGATGGCCCTTTGGAAATGTTATGCGCTCTGCCGGCTTTTTGGGTAGGTTTACTGTATGATGAGGTTTCGCTACAAAATGTTCTAGATATGATTGCTGATTGGACCCCCGAAGACATACAGAATTTAAGGAATAAGGTTCCTATAACTGGTTTAACGACTCCAGTTCAAGGTAGACTGCTGCAACATATTGCAGAAGACACTTTGAAGTGGGCAAAGGATGGCTTGGACAGAAGATGCTTAAATGAATCCGTTTTCTTGGATCCATTGAAGGAAGTGGTTGGAACAGGTTTGACCCAAGCCGACAAGCTATTGGAGATGTATAATAACAATCTCTCGCAGACTCTCACCGTAGGTTCAAGCTTCAAAGTCCCTGCTCTCTCTTGGTTCAGAGCTCCTTCTTTGTTCTTTCTCCTTCGCTGGTTGATATCAGCAAGTGTTTGA 1587 0.4216 MGSLDLKWNSSGCMVLRKVESTKTKGEDMSSLCGSSAYLYKRRGRRIRCREQRVNIVATGPAIDHAPVIAKPLTKDDLIDYFVSGCKPKHNWRIGTEHEKFGFELKTLRPINYKQISALLNRIATRFDWEKIMEGDNIIGLKNGKQSISLEPGGQFELSGMPLKTLHQTCDEINSHLYQAKTVAEEMGIGFLGLGFQPKWRLEDIPGVPKVRYNIMQNHLGKFGSPTIESLFMTCSVQVNLDFSSEADMIKKMRASIALQPLAAALFANSPFKEGVPNGYLTIRSHRVGQMDKSRAGILPFVFYDTFGFEKYVDYALDVPMLFVYRKNKYIDCRGMSFRDFMAGKLPVIPGQVPTLGDWENHLTTIFPEVRLKRYMEMRGADDGPLEMLCALPAFWVGLLYDEVSLQNVLDMIADWTPEDIQNLRNKVPITGLTTPVQGRLLQHIAEDTLKWAKDGLDRRCLNESVFLDPLKEVVGTGLTQADKLLEMYNNNLSQTLTVGSSFKVPALSWFRAPSLFFLLRWLISASV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02200 528 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 83 495 IPR035434 GO:0004357|GO:0006750
Gma01g02200 528 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 72 497 IPR011556 GO:0004357|GO:0006750
Gma01g02200 528 Gene3D - 58 499 - -
Gma01g02200 528 SUPERFAMILY Glutamine synthetase/guanido kinase 84 499 IPR014746 GO:0003824
Gma01g02200 528 PIRSF GCL 59 501 IPR035434 GO:0004357|GO:0006750
Gma01g02200 528 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 83 495 - -
Gma01g02200 528 Pfam Glutamate-cysteine ligase family 2(GCS2) 126 416 IPR006336 GO:0004357|GO:0042398
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02200 Gma-Chr1 57249673 57257284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02200 K01919 - gmx:100775188 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02200 01 57249673 57257284 Gma01g02200 01 57249673 57257284 ECH
Gma01g02200 01 57249673 57257284 Gma11g00215 11 1705905 1709415 GST
Gma01g02200 01 57249673 57257284 Gma08g00136 08 1133171 1141828 PCT