Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02189 ATGCCAGCACACAAACCAGTTGTTGGGTTATCATGGCAACCACAGTTGCCTATTCCATCATCATTCAAAGCCACTGATGGGTCTCATACCAAACCTCAAACTGAGGCATCAAGCAGCACTGTTAGGAAATCCAGTTCAGAACTGGTTGATGGCCTTTTCGTCCCTCCAAACGATCCCAGAAAATTAAACAAGTTACTGAGAAAGCAAGCTAAAGATACTGCTGGGAAAAATTGGTTCAATATGCCGGCCCAAACCATCACCCCTGAGTTGCAGAAAGATTTGAAGTTATTAAAGTTGAGGGCTGCCCTTGATCCAAAGCGGCACTACAAGAAAGGTGATTCCAAATCGAAGACACTTCCCAAATATTTCCAGGCAGTTGTAGATTCTCCGTTGGACTTTTTCTCAGGCAGATTAACAAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCTGATCAAAACCTTGCAGCCTATAGGAAGCGGAAGTTTAGAATTATTACAGGAATATACAGTAGGATGATGCAGAGATTCATAACTGAAAGGTCGAAGAAACAGTTAACAACGGATTCCACTCTTGTAAAAAAGGCTCCAGTATCTACTTACACTCCTCTGCTACTCCTTCTCATCCTCCTCACCACTGCCTTTGTCTCTTCCCTCTGGTCTACGCTTTCTACGACTAACACTAAACCGACGATTATTGGCAAGAAAACCTCAGTGGCAAATGTTGTTTCTGCAAAGGATAGCAAAAGCGAAGAAAAATCTAGTAGCAGGAAAAGGTTTCAATTAGAAGCGACATTAAACTGCAGCAATAATGGGAAGCAAAGATGTACAAGTTATCCGACAAGTGGAGTGTTTGAAAGGGAGGAGGGAGGGGTGTGTCCGGAGTACTTCCGGTGGATCCACGAGGATGTTGGGGCGTGGAAAGAGAGAGGGATAAGCAGGGAGATGGTGGAGAGAGCGAAGAAGAGTGCACATTTTAGGTTAGTAGTGAAGAGAGGAAGGGTGTACGTGGAGAGGTATAAGAAATCGATACAGACACGTGAGGTGTTCACGATGTGGGGCATTGTGCAGCTTCTGAGGAAGTACCCAGGTAAAGTGGCAGACCTTGAGCTCATGTTTGATTGTGATGACTTACCAGTAATCCGTGGGAGCAGCCTGGCTGGGCCTCCACCCCTTTTCCGTTACTGCGGTGACCGCTGGACGGACGACATTGTCTTCCCTGATTGGTCCTTCTGGGGATGggctgagattaatataaggccttgggaacatgtgttgaaggagatggaaaagggcaatagaaggattaaatggaatgacagagaaccatatgcctattggaagggaaacccttttgttgccgaaaccagacaagatctcctcaaatgtaatgtttcaaccacccaagactggaatgctcgtttatatgtgcaggattggattcaagaatctcaacaaggattcaataactcaaacttggcaagtcaatgcacacatagatacaagatatatattgaaggatatgcgtggtctttgattggggtaataatcataaggaagaggcacaaaaaattggtaaagcagcaagcaagtttattcaagaagagctaa 1617 0.355 MPAHKPVVGLSWQPQLPIPSSFKATDGSHTKPQTEASSSTVRKSSSELVDGLFVPPNDPRKLNKLLRKQAKDTAGKNWFNMPAQTITPELQKDLKLLKLRAALDPKRHYKKGDSKSKTLPKYFQAVVDSPLDFFSGRLTKKERKATLADELLSDQNLAAYRKRKFRIITGIYSRMMQRFITERSKKQLTTDSTLVKKAPVSTYTPLLLLLILLTTAFVSSLWSTLSTTNTKPTIIGKKTSVANVVSAKDSKSEEKSSSRKRFQLEATLNCSNNGKQRCTSYPTSGVFEREEGGVCPEYFRWIHEDVGAWKERGISREMVERAKKSAHFRLVVKRGRVYVERYKKSIQTREVFTMWGIVQLLRKYPGKVADLELMFDCDDLPVIRGSSLAGPPPLFRYCGDRWTDDIVFPDWSFWGWAEINIRPWEHVLKEMEKGNRRIKWNDREPYAYWKGNPFVAETRQDLLKCNVSTTQDWNARLYVQDWIQESQQGFNNSNLASQCTHRYKIYIEGYAWSLIGVIIIRKRHKKLVKQQASLFKKS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02189 538 PANTHER O-GLUCOSYLTRANSFERASE RUMI-LIKE PROTEIN (DUF821) 193 514 - -
Gma01g02189 538 Pfam Glycosyl transferase family 90 293 514 IPR006598 -
Gma01g02189 538 MobiDBLite consensus disorder prediction 18 50 - -
Gma01g02189 538 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 193 514 - -
Gma01g02189 538 MobiDBLite consensus disorder prediction 18 46 - -
Gma01g02189 538 Pfam Fcf2 pre-rRNA processing 71 164 IPR014810 -
Gma01g02189 538 SMART cap10 367 536 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02189 Gma-Chr1 57153063 57159254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02189 - - gmx:100793663 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02189 01 57153063 57159254 Gma01g02189 01 57153063 57159254 ECH