Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02187 ATGGCCAAGAAGGTTTACCCTCAGGATCCCACTTCCTCTCCCTGCATGTCCCATGGACCAGAAACATATACCCTTTGGATGAAATCACTTATTCTCCACTCTAACGGTTGCACCGTCTATGATTCAAATGGTGTCATCGTTTATCGCGTTGATAACTATGACACAAAGGGTAGAAGACACGTTAACCTTTTGGATCTGCGAGGCAGAGTTCTCTGTACCATACACAAGAAACTACTTGCTTTTGGACGTTGGGATGTCTATAGAGGTAGTGATAATTCTAACTTCAAAACCCAGGAGAAGCCGTGGTTTCAAGTTAAAAGATGTTATAAGATGGTCACAAGAAAAATAACGTGCCAGATTACAGTGGAGTGCCAAAAGTACTGCATAAAGAAAATCGGTGGCAAAACAACATTTCAGATTGTCAACATAGATGGAGACACGGTTGCCGATGCAAAGCAAAAACACTCGTCATCGGGAGTTGTGCTGGGTAATGATGTTCTAACGTTGGATGTGGAGGGCGGAATAGATCATTCTCTCATAATGGCTCTTGTCATTGTGTTCGGATTAATCTGCGGCAGAATGTGA 585 0.4291 MAKKVYPQDPTSSPCMSHGPETYTLWMKSLILHSNGCTVYDSNGVIVYRVDNYDTKGRRHVNLLDLRGRVLCTIHKKLLAFGRWDVYRGSDNSNFKTQEKPWFQVKRCYKMVTRKITCQITVECQKYCIKKIGGKTTFQIVNIDGDTVADAKQKHSSSGVVLGNDVLTLDVEGGIDHSLIMALVIVFGLICGRM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02187 194 Gene3D - 13 193 IPR038595 -
Gma01g02187 194 SUPERFAMILY Tubby C-terminal domain-like 12 191 IPR025659 -
Gma01g02187 194 Pfam LURP-one-related 12 186 IPR007612 -
Gma01g02187 194 PANTHER - 3 193 IPR007612 -
Gma01g02187 194 PANTHER PROTEIN LURP-ONE-RELATED 4 3 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02187 Gma-Chr1 57142074 57143290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02187 - - gmx:100815833 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02187 01 57142074 57143290 Gma01g02187 01 57142074 57143290 ECH
Gma01g02187 01 57142074 57143290 Gma11g00229 11 1783805 1784657 GST
Gma01g02187 01 57142074 57143290 Gma05g02019 05 41520526 41524731 PCT
Gma01g02187 01 57142074 57143290 Gma08g00124 08 1054760 1055476 PCT