Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02167 ATGAAACGGGCGGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTTCAAGCATTATGGAAAAGTTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACTAAGGCAGAAAATTCGGCTGCTGATGCTAGTGCTGCTTTTTCTGGGAAAAAGCTCTTGCCTGAAGTAATAATCAATGAAAATAAATCTTCTGGAGAAAAAACTGGGTCTACTCCTGTTAGTACTGCTACAAATTTTACTAGTTCTTGGAGCCCTGGATTATTTTCAAACAGTCAAGGCATTTTTGGAATTGGAaatcaaagttcggctatctctaatcagagtttgtctccctctaatcaaagtttggctccctTTAACAACAATGCTTCAGATGATGTAGATGGTGAAAATGAGTTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGTCAGAAGAGAAAGGTGTAGTAGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAGGAGATAAAGATGCATGGAAAGATAAAGGAATGGGCCAACTGTCTATTAAATGCAAAGAGGGTGTCAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAGTTCTTCTCAACGCCCTGTTGTATCCAGGAATCAAAACAAATCTGCAGAAGAACTCTCTTGTTGCAATATTCCATACTTCGGGTAATGCTGACGGAAGTGGTGGAGATAACGATAGTGTTGTTGCACGTACATTCTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACCATCAAAGAATATGCTCCAATGTCTTGA 921 0.3757 MKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKAENSAADASAAFSGKKLLPEVIINENKSSGEKTGSTPVSTATNFTSSWSPGLFSNSQGIFGIGNQSSAISNQSLSPSNQSLAPFNNNASDDVDGENELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPGDKDAWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKVLLNALLYPGIKTNLQKNSLVAIFHTSGNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIKEYAPMS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02167 306 ProSiteProfiles Ran binding domain type 1 profile. 173 306 IPR000156 GO:0046907
Gma01g02167 306 SUPERFAMILY PH domain-like 173 303 - -
Gma01g02167 306 Gene3D - 59 305 IPR011993 -
Gma01g02167 306 PANTHER RAN BINDING PROTEIN 1 304 IPR045255 -
Gma01g02167 306 MobiDBLite consensus disorder prediction 133 156 - -
Gma01g02167 306 Pfam RanBP1 domain 171 301 IPR000156 GO:0046907
Gma01g02167 306 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 1 304 - -
Gma01g02167 306 MobiDBLite consensus disorder prediction 133 176 - -
Gma01g02167 306 CDD RanBD_NUP50 175 303 - -
Gma01g02167 306 SMART ranbd_3 163 302 IPR000156 GO:0046907
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02167 Gma-Chr1 56963520 56969587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02167 K14295 - gmx:100788565 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02167 01 56963520 56969587 Gma01g02167 01 56963520 56969587 ECH
Gma01g02167 01 56963520 56969587 Gma11g00242 11 1906627 1912848 GST