Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02158 ATGGCAGCATCGTCTTCTTCTCCTTCAAAGGAGCCACAACTCAAGGACGAGGAGGATCGGGAACAAGAGGAACAACACCAACAGCCACAGCCAGTCAAAGAGTGCGTCCACAAAACCAAAACGATCCAGTTTCTCGGACGTACCACTCCGATCGTTCTTCAAAACGACAACGGACCCTGCCCGCTCCTCGCTATCTGTAATGTTCTGCTGCTGAGAAACAACTTAAATTTGAGTCCAGATATTGCTGAAGTCTCACAGGAGAAATTGCTTTCATTGGTTGCTGAACGATTAATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTTGAAAATCAACAACAGAACATTGCTGATGCAATTGACTTACTCCCTAGGCTTGCTACTGGAATTGATGTAAATATAAAATTTAGGAGAATAGGTGATTTTGAATTCACTCGAGAGTGTGCCATATTTGATCTGCTGGACATTCCCTTGTATCATGGCTGGATTGTTGATCCTCAGGATTATGACACTGCGAATGCAATTGGATCAAAATCCTATAATTCCCTTATGGGAGAGCTTGTCTCTCTTGAAACACTAAACATGGAGGTCCATCATAAAAATAATCCAGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTACTCTTGGAGTTCCCTCTCCCAGTCTTTCAAAAGCCAGGTCGTTTGATGATTCTTCTCATTCTATTTCTGATAATATACTAAGAAAAGGTGATCTAGAAGAAGAGGCAGAGTTGTTGAGAGTCTTGAAAATGTCCGAGGATGAAAGTGATCCTGTTGTAGGTCACATGCATGGAGGAGAAATTTCTGTCAGTATGGATAGAAAAATGTGTAATGACGAGGTTATAAATATGGATTGTGGAGATAAATTAGGAAATAGCTCTGGTGCTGGTAACAGTAACTTTCATGAGCATGGCCCAGAGCCTTCCTTATCTGATGATTGTGCTGCTTCTGGCAAAGACCACAGCGAACAGATATCTTCTACTTCTACACTGGGAGAGGCAGCTAATTCATCCTTAAAGACTGATACCATAAGTGACCTTCATCAATCAACTTATACGGGACCTGAAGAATCTTTTGACCTGAATGATGTGATTGAGAAGAACAGCCTTGATGCATTGGTTCAGAATGAGAGTGAAGTTATCCCTTCTCCTGAAAAACACTCTGTCTCTTTGTTTGAGTGCCGTGCAGATTTTTCTGGAGGTGATGGAAAAGTCCATGATCAATCCACTCCTACAACTATAGATCATGAAGTTGTAGGTGAATCTCATGGACCTGATGCCACAGGATTATCATTCTCATCCCCTGGCCATACAAATTCAGATTCATCTAGTGTCAGATATCATCAAACTGATGTTTCTGGAGCATTGACTTCAAGTGTTCAAGGGAGTGAGCCCATATATGAAGGAGAGGAATGTGTATTGGATACAAGAACTGGAAATTTTGAGGATCGTGAACCTGTTTATGAAGGTGAGGTGGTACTTGCAGAACAGGCTGACAGAAGCACCTTAGTTGCTCCTGATCTAAGAGCTAAGGATGAACTTACTCCAGAACAAGGTGAATTGATCAAGAGTTTCTTGAGGAATAATGCCAGCCAGTTGACATTTTATGGTCTTTTCTGTTTACAAGATGGGCTTAAAGAGCGTGAGCTGTGTGTTTTTTTCCGTAACAATCATTTCAGCACCATGTTCAAGTTTGAGGGTGAGCTCTATCTTCTAGCCACGGACCAAGGTTACATAAATCAGCCTGATCTGGTCTGGGAAAAACTGAATGAGGTCAATGGTGATACATTGTTTATGACCGGTAATTTCAAGGAATTCAAGGTAGAAAACCATGAAAGTAGTACTTGGGATGAGAACAATGCTCTGACCAGCACTGCCGACTATCTTGCCAGCATAGATAGTGCAACACATGCAGGCTTAGATATCAATTCTGATCTCCAATTAGCAATAGCCTTGCAACAACAGGAGTTTGAGCAGCAGCCACCACGCCAGAATAATTCACAGCCGCAATCATCCATTAGTGGTAGCTCTAGACTGGTCACAGGTCCCCAGGTGGCAAGAAACACTGGAAGACATTCATCTTCATCAACATCTGCATCTCCCAGGTCTGATGCAAAATCCAAAGATAAATGTATAGTGATGTGA 2181 0.4186 MAASSSSPSKEPQLKDEEDREQEEQHQQPQPVKECVHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIGDFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNSLMGELVSLETLNMEVHHKNNPEEDCVDFVAATTATLGVPSPSLSKARSFDDSSHSISDNILRKGDLEEEAELLRVLKMSEDESDPVVGHMHGGEISVSMDRKMCNDEVINMDCGDKLGNSSGAGNSNFHEHGPEPSLSDDCAASGKDHSEQISSTSTLGEAANSSLKTDTISDLHQSTYTGPEESFDLNDVIEKNSLDALVQNESEVIPSPEKHSVSLFECRADFSGGDGKVHDQSTPTTIDHEVVGESHGPDATGLSFSSPGHTNSDSSSVRYHQTDVSGALTSSVQGSEPIYEGEECVLDTRTGNFEDREPVYEGEVVLAEQADRSTLVAPDLRAKDELTPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFKVENHESSTWDENNALTSTADYLASIDSATHAGLDINSDLQLAIALQQQEFEQQPPRQNNSQPQSSISGSSRLVTGPQVARNTGRHSSSSTSASPRSDAKSKDKCIVM 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02158 726 MobiDBLite consensus disorder prediction 439 473 - -
Gma01g02158 726 MobiDBLite consensus disorder prediction 307 349 - -
Gma01g02158 726 MobiDBLite consensus disorder prediction 332 349 - -
Gma01g02158 726 MobiDBLite consensus disorder prediction 428 473 - -
Gma01g02158 726 MobiDBLite consensus disorder prediction 669 726 - -
Gma01g02158 726 Pfam MINDY deubiquitinase 66 190 IPR033979 GO:0004843|GO:1990380
Gma01g02158 726 PANTHER NF-E2 INDUCIBLE PROTEIN 2 726 IPR007518 GO:0004843|GO:1990380
Gma01g02158 726 MobiDBLite consensus disorder prediction 11 33 - -
Gma01g02158 726 MobiDBLite consensus disorder prediction 1 34 - -
Gma01g02158 726 MobiDBLite consensus disorder prediction 669 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02158 Gma-Chr1 56868162 56874927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02158 K01309 - gmx:100808340 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02158 01 56868162 56874927 Gma01g02158 01 56868162 56874927 ECH
Gma01g02158 01 56868162 56874927 Gma11g00247 11 1982533 1989444 GST