Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02143 ATGGCCACCTCTCAGGGTGCTAACAGTTACAGAAATGCCAGAACCTCTCTCAAACCTCACGTCAAGTCAAAGCCTACGCAACAACGCCGTAATAGCACCGGCTCCGTCAACGGCAAGGAACACGCTGCTGTTCCCGGAAGAGTTAGAGTGGCTGTTAGATTGCGGCCACGGAATGCAGAGGAATCAGTGGCGGATGCTGACTTTGCTGACTGTGTTGAACTGCAGCCAGAGCTCAAGAGGTTGAAACTTCGGAAAAACAATTGGGATGCTGATACTTATGAATTTGATGAGGTTCTCACCGAATTTTCATCACAAAAACGTGTTTATGAAGTTGTGGCCAGGCCTGTTGTGGAGAGTGTACTGGATGGCTACAATGGAACAATTATGGCATATGGGCAGACTGGTACTGGTAAGACTTATACTCTTGGACGACTTGGAGAGGAAGACAATGCTGCACGTGGAATAATGGTGCGGGCCATGGAGGATATTCTTGCAGATGTTTCTTTGGAAACTGATTCAGTCTCAGTCTCTTATTTGCAGCTTTATATGGAGACTATACAAGATCTGCTTGACCCTGCCAATGATAACATAACCATCGTAGAAGATCCCAAAACTGGTGATGTTTCATTACCTGGAGCTAGCCTAGTTGACATTAGGGACAAGCAGAGTTTTGTAGAACTATTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACAAAACTGAATACAGAATCTTCTCGAAGTCATGCTATTCTGATGGTGCATGTAAAGAGATCCGTGAAAGGAATAGATGCTGCTCTTTCAAGTGAAAATGGCAATCATCCACACATGGTTAAATCAATAAAGCCACCTCTTGTTCGGAAAGGCAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAGCGAATTGACAAGTCAGGAAGTGAAGGACATACATTAGAGGAAGCCAAATCTATCAATCTGTCCTTGAGTGCATTGGGGAAGTGTATTAACGCACTTGCAGAGAATAGTGCACATGTGCCATTTCGTGACTCAAAGCTTACTAGATTGCTACGTGATTCATTTGGAGGTACAGCGAGAACTTCACTAGTAATCACTATTGGGCCATCTCCACGGCATAGGGGAGAGACTGCCAGTACTATAATGTTTGGACAGAGGGCTATGAAGGTGGAAAACATGGTAAAGCTAAAGGAGGAATTTGATTACAAAAGCTTATCTAGGAGGTTAGACATAGAATTAGATAAACTCATTGTGGAGCATGAAAGGCAGCAGAAGGCATTTGAGGATGAGATTGAAAGGTTATCCACTGAAGCACAACATCGGATATCTGAGGCTGAAAGAAACTATGTAGATTCATTGGAGAAGGAGAGATCAAAATATCAGAAAGACTATATGGAGTCAATTAAAAAGCTTGAAGAGCAGTTTGTGATGAATCAACAAAAGAATGAGGAATCTCATATGAAATTGAGTGGAGAGATTCCCAGAGTGTCTGCTGAGGAACTGGCTGATTTGAAAAAAATGCTTCGGAAAGAGACTCATCTAAGAAAAGCTGCTGAAGGGGAAGTAAACAATCTGAAGATTCAAGTGGCTGAACTAAAAAAGTCAGAGGCATCAAGAAAGTCAGAGATCTTAAAACTTCATACCATGTTGGAAGATAAGGAACGCCAAAAAGAGAAACTTGAAGGAGAAATAGCAATATTACAAAGTCAATTGTTGCAGTTAAGTCTTGAAGCTGATGAGACAAGACAACAACTTGACAGAGGTGGGTTTGAAAAAGAAATGGGTGGTCTTAATTCTCTCACTTCTCAAGTTAAGCATCAACAGCAAGCTTCAGGAAATGGAGAGAAACCCTCAATAGCCAAGCTCTTTGAGCAAGTGGGATTGCAGAAAATTTTGTCTTTGCTTGAAGCAGAAGATGCTGATGTGCGAATCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCTGAAGAAACAAATCAAGGGAAAATTGTGGAAGCCGGAGGGCTCACATCCTTGCTTAACCTGCTTAAGAGCTCACAAGATGAGACCATACATAGAGTTGCTGCAGGTGCAATTGCAAACTTGGCAATGAATGAAACCAACCAAGAACTCATTATGGCCCAAGGGGGCATTAGTTTGCTGTCATTGACTGCAGCCAATGCCGAAGATCCTCAAACCCTTCGAATGGTTGCAGGAGCCATTGCTAATCTTTGCGGCAATGATAAACTACAAACAAAACTAAGGTCCGAAGGTGGTATGAAGGCACTGCTGGGAATGGTCAGATGCAGACATCCTGATGTACATGCACAAGTTGCTCGTGGAATAGCAAATTTTGCGAAGTGCGAGTCAAGAGCATCTAGTCAAGGTAACCTATGGACAAAGAGTGGAAGGTCTTTCCTTATTGAGGATGGTGCCCTTCCATGGATTGTTCAAAATGCAAACAACGAAGCTGCATCAGTTAGGCGTCATATTGAACTTGCACTCTGTCACTTGGCACAACATGAAATAAATGCAAGAGACATGATTAGTGGGGGTGCATTGTGGGAGCTAGTTCGTATCTCCCGAGATTGTTCAAGAGAAGACATAAAGACTCTTGCACATCGAACACTAGTCTCCAGCCCCACTTTCCAAGCTGAAATGAGGCGTTTGCGGGTAAATTACTGA 2664 0.4302 MATSQGANSYRNARTSLKPHVKSKPTQQRRNSTGSVNGKEHAAVPGRVRVAVRLRPRNAEESVADADFADCVELQPELKRLKLRKNNWDADTYEFDEVLTEFSSQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDNAARGIMVRAMEDILADVSLETDSVSVSYLQLYMETIQDLLDPANDNITIVEDPKTGDVSLPGASLVDIRDKQSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKGIDAALSSENGNHPHMVKSIKPPLVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMVKLKEEFDYKSLSRRLDIELDKLIVEHERQQKAFEDEIERLSTEAQHRISEAERNYVDSLEKERSKYQKDYMESIKKLEEQFVMNQQKNEESHMKLSGEIPRVSAEELADLKKMLRKETHLRKAAEGEVNNLKIQVAELKKSEASRKSEILKLHTMLEDKERQKEKLEGEIAILQSQLLQLSLEADETRQQLDRGGFEKEMGGLNSLTSQVKHQQQASGNGEKPSIAKLFEQVGLQKILSLLEAEDADVRIHAVKVVANLAAEETNQGKIVEAGGLTSLLNLLKSSQDETIHRVAAGAIANLAMNETNQELIMAQGGISLLSLTAANAEDPQTLRMVAGAIANLCGNDKLQTKLRSEGGMKALLGMVRCRHPDVHAQVARGIANFAKCESRASSQGNLWTKSGRSFLIEDGALPWIVQNANNEAASVRRHIELALCHLAQHEINARDMISGGALWELVRISRDCSREDIKTLAHRTLVSSPTFQAEMRRLRVNY 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02143 887 CDD KISc 47 388 - -
Gma01g02143 887 PANTHER KINESIN-LIKE PROTEIN KIN-UA 33 879 IPR033291 GO:0008017|GO:0032886|GO:0048364
Gma01g02143 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 425 IPR027417 -
Gma01g02143 887 SMART arm_5 616 655 IPR000225 GO:0005515
Gma01g02143 887 SMART arm_5 698 739 IPR000225 GO:0005515
Gma01g02143 887 SMART arm_5 656 697 IPR000225 GO:0005515
Gma01g02143 887 SMART arm_5 740 780 IPR000225 GO:0005515
Gma01g02143 887 Coils Coil 417 448 - -
Gma01g02143 887 PRINTS Kinesin heavy chain signature 123 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g02143 887 PRINTS Kinesin heavy chain signature 291 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g02143 887 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g02143 887 SMART kinesin_4 45 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g02143 887 Gene3D Kinesin motor domain 38 420 IPR036961 -
Gma01g02143 887 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 626 668 IPR000225 GO:0005515
Gma01g02143 887 Pfam Kinesin motor domain 53 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g02143 887 Gene3D - 608 881 IPR011989 -
Gma01g02143 887 Coils Coil 450 470 - -
Gma01g02143 887 MobiDBLite consensus disorder prediction 1 43 - -
Gma01g02143 887 MobiDBLite consensus disorder prediction 1 38 - -
Gma01g02143 887 ProSitePatterns Kinesin motor domain signature. 290 301 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma01g02143 887 Coils Coil 543 584 - -
Gma01g02143 887 SUPERFAMILY ARM repeat 615 870 IPR016024 -
Gma01g02143 887 ProSiteProfiles Kinesin motor domain profile. 47 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma01g02143 887 PANTHER KINESIN-RELATED 33 879 IPR027640 GO:0003777|GO:0007018
Gma01g02143 887 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 667 710 IPR000225 GO:0005515
Gma01g02143 887 Coils Coil 501 535 - -
Gma01g02143 887 Pfam Armadillo/beta-catenin-like repeat 663 696 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02143 Gma-Chr1 56757334 56766936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02143 48 419 Miscellaneous Gene Families AT2G21380 34.367 5.79e-46 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02143 - K10396 gmx:100804612 1683.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02143 01 56757334 56766936 Gma11g00263 11 2081311 2090520 GST