Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02139 ATGGAGTGGCCTGCGTGTACGGACGAATACGAAAAGCTCATAATTCGGATGAACACTCCCAGGGTTGTCATTGACAATTCCGTTTTCTCCTCAGCTACGCTAGTCAAGGTTGACAGCGCCAGAAGGCATGGTATTCTATTGGATGCTGTAGAAGTGCTAGCTGACCTGAACCTTTCAATTAAGAAAGCGTATATTTCTGCTGATGGCAAGTGGTTCATGGATGTTTTTCATGTCACCGATCAAAATGGAAACAAGATAATCGACGAGAGTGTTTTAAAATATATTGAACAGTCACTTGGGAACATTCACTATGGAAGAACCAACCTCTCTAACGGTCTCACTGCGTTGGAATTAACAGGAACTGACCGAGTTGGTCTTTTATCGGAAGTGTTTGCTGTACTGGCTGATCTTCAATGTGATGTGGTTGAGTCTAAGGTTTGGACACACAATGGCCGTATTGCCTCCTTAATCTATGTAAAAGATTCTAGTTCTGGGTCTGCTATTGAGGACTCTCAGAAAATTAATAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAAATTTCTTTCTCTATGGCCGTGATGCACACTGAAAGAAGGCTACATCAGTTGATGTTTGTTGACCGTGATTATGAAAGGGCTCCTATTCTTAAATTGACTTCCGATAACGCATCGGTGACAGTCCAGAATTGGGAAGGAAGGGGTTATTCAGTCGTGAATGTTCAGTGCAAAGATCGAACCAAGCTATTATTTGACATTGTATGCAATTTGACAGACATGGAATATGTTGTATTCCATGCAACTATTAACACTGATGGTGACCGAGCTTACTTGGAATTTTATATAAGACACAAGGATGGGACTCCAATTAGTTCAGAACCAGAACGTCAACGTGTAATTCAATGCTTAAAAGCTGCTGTAGAGAGAAGGGCATCTGAGGGTGTTCGATTAGAGTTATGCACAGAAGACAGGCAGGGGCTTCTAGCAGAAGTGGTGAGAACATTCCGAGAGAATGGGCTCAATGTGACCAGGGCTGAGATATCTACCATAGGGAATATGGCTAAAAATATATTCTATGTAACGGATGCGATTGGAAATCCAGCTGATTCCAAAATTATCGAATCTGTTAGGCAGAAAATTGGGTTAAGCAATTTAGAGGTGAAGGAGTTGCCATTGATAAATCATCAGGAGGCAGAGAGAGAGGATCAAGCGGTTGGAATGGGTGGGGCAGTGTTGTTGTCCATTGGGAGCCTTGTGAGAAGGAATCTGTACCATTTGGGACTAATCAAATCCTGTTCTTAA 1326 0.4186 MEWPACTDEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSIKKAYISADGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIELRLRNVLKGDNDIRSAKISFSMAVMHTERRLHQLMFVDRDYERAPILKLTSDNASVTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVVRTFRENGLNVTRAEISTIGNMAKNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVKELPLINHQEAEREDQAVGMGGAVLLSIGSLVRRNLYHLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02139 441 ProSiteProfiles ACT domain profile. 34 110 IPR002912 -
Gma01g02139 441 CDD ACT_ACR_1 32 100 - -
Gma01g02139 441 SUPERFAMILY ACT-like 244 312 IPR045865 -
Gma01g02139 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Gma01g02139 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Gma01g02139 441 Pfam ACT domain 325 384 IPR002912 -
Gma01g02139 441 Gene3D - 323 408 - -
Gma01g02139 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Gma01g02139 441 CDD ACT_ACR_3 244 318 - -
Gma01g02139 441 Pfam ACT domain 118 162 - -
Gma01g02139 441 SUPERFAMILY ACT-like 320 394 IPR045865 -
Gma01g02139 441 CDD ACT_ACR_4 322 393 - -
Gma01g02139 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Gma01g02139 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
Gma01g02139 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Gma01g02139 441 Gene3D - 113 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02139 Gma-Chr1 56717906 56720615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02139 - - gmx:100780903 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02139 01 56717906 56720615 Gma01g02139 01 56717906 56720615 ECH
Gma01g02139 01 56717906 56720615 Gma11g00267 11 2124925 2128079 GST