Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02089 ATGGCTCTTCCTTCACTATCCTTTCTCTTCATCTTCACTTCCTTCATCGTCTCCGTCTCACACTCAATACCCTTTATTGTTATTCATGGAATTGGGGATCAGTGCTCTAATCGTGGAGTGAAAAAATTCACACAGCAATTGAGCAGCTTCTCTGGTGCTGAAGGATATTGTGTCGAGGTTGGAAATGGATCATGGGATTCATGGTTTGAGCCTTTGAAAGAGCAGGCTGAGATTGTTTGTGAAAAGGTGAAGCAAATGAAAGAATTGAAGGAAGGATACAACATTGTTGGACTTTCCCAGggaaatttaattggtcgaggcgttgtggaattttgtgaaggaggacctcctGTTAAAAACTTTATCTCTTTAGCAGGCCCTCACGCTGGTACTGCTTCAGTTCCCCTATGTGGTTCAGGTATCTTCTGCGTTCTTGCAGACACCCTCATCAAGGGAGAGGTTTACAGTAGCTATATTCAAGAACACTTGGCTCCTAGTGGATATCTTAAATTACCGAATGCCATACCTGATTATTTGGAGAACTGTAGATTTCTTCCAGTGCTTAACAATGAAATACCAGATAAGAGAAATTCTACTTACAAGGAAAGATTTAGTAGCTTGCAGAATTTGGTACTTATCATGTTTGAGCACGACACTGTTTTAATACCAAAGGAAACTTCCTGGTTTGGATATTACCCAGATGGCTACTTCAAGCCAGTTTTACCACCACAATCAACAGAACTCTACATTGAGGATTGGATAGGCTTAAGAACTCTAGATGAAGCTGGAAAAGTTCACTTCATTAGTGTTCCAGGAAATCATCTTGGAATCTCCCAAGAGGATATGAAAAAGCATGTAGTGCCATATTTGAAGGATCACATATTCGTACAAGATAGTATCAATAAGGCTAGGTTCAGGTTGCGAGGAGTTAATCAGAAAGTTATTCAAAGTAATATGATGGAACAATCTCAAAAGGAGGAGGTGGAACCATCATCCTCCCCATTACTTGATGGATCATTGCCATACTGGTGGCCTACACCATTCAAGACTTTCCTTGGTGAATTGATTGGCATTAATGAAGAGGAATCTATACAAAGGAAATAA 1104 0.3813 MALPSLSFLFIFTSFIVSVSHSIPFIVIHGIGDQCSNRGVKKFTQQLSSFSGAEGYCVEVGNGSWDSWFEPLKEQAEIVCEKVKQMKELKEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGSGIFCVLADTLIKGEVYSSYIQEHLAPSGYLKLPNAIPDYLENCRFLPVLNNEIPDKRNSTYKERFSSLQNLVLIMFEHDTVLIPKETSWFGYYPDGYFKPVLPPQSTELYIEDWIGLRTLDEAGKVHFISVPGNHLGISQEDMKKHVVPYLKDHIFVQDSINKARFRLRGVNQKVIQSNMMEQSQKEEVEPSSSPLLDGSLPYWWPTPFKTFLGELIGINEEESIQRK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02089 367 Gene3D alpha/beta hydrolase 15 301 IPR029058 -
Gma01g02089 367 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 7 308 - -
Gma01g02089 367 Pfam Palmitoyl protein thioesterase 24 274 - -
Gma01g02089 367 PRINTS Palmitoyl protein thioesterase signature 16 38 IPR002472 GO:0098599
Gma01g02089 367 PRINTS Palmitoyl protein thioesterase signature 222 240 IPR002472 GO:0098599
Gma01g02089 367 PRINTS Palmitoyl protein thioesterase signature 267 285 IPR002472 GO:0098599
Gma01g02089 367 SUPERFAMILY alpha/beta-Hydrolases 20 290 IPR029058 -
Gma01g02089 367 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02089 Gma-Chr1 56251133 56257082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02089 17 292 Acyl Lipid Metabolism Gene Families AT3G60340 69.928 1.35e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02089 K01074 - gmx:100809770 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02089 01 56251133 56257082 Gma01g02089 01 56251133 56257082 ECH