Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02082 ATGGCCTATAAGCCTGGCCAATGGGCCCACAAAGGCCCAAGGCAAGAGTATAAAATGAGAGCAGTGACAAGTGCAAAGGTATTGTGGAAGAACAAAGCAATGGCTTCAGCTAAAAGGTGGCTTCCGCTCGAAGCTAATCCTGACGTCATGAATCAGTTCCTTTGGGGGCTTGGACTTCGAGAGGATGAGGCAGAATGCTGTGACGTTTATGGCTTAGATGAAGAGCTTCTGGAAATGGTTCCAAAGCCCGTTCTTGCCGTGCTTTTTCTTTATCCCATAACCACCCAGAGTGAAGAAGAGAGGTTGCAGCAGGAAAATGAAAAAAAGGAATATAACAGTAGAGTCTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGGACAATTGGGCTGCTTCATGCTCTTGGTAACTTGACTTCTGAAGTCAAGCTCGTTGAGGGGTCGTTCTTTGATAACTTTTTTAAATCTACTGCAAGCTTGGATCCATTGCAGCGTGCAACATTTCTTGAGAATGACAAAGAAATGGAAGTGGCTCATTTGGTGGCAGCAACTGCTGGTGATACAGAGGCATCAGACAATGCAACTGCACATTTCATATGCTTTGCTTGTGTGGATGATGAACTTTATGAGCTTGATGGAAGAAAGTCAGTGCCAATATCTCACGGTCCATCATCACCAAGTACTTTGTTAAGGGATGCAGCTAAAGCAATACAGAGCATGATCCAGAAAAATCCAGACTCCTTCAACTTCAATGTCATTGCCTTGTGTAAGAAATCCGGGTAG 783 0.4406 MAYKPGQWAHKGPRQEYKMRAVTSAKVLWKNKAMASAKRWLPLEANPDVMNQFLWGLGLREDEAECCDVYGLDEELLEMVPKPVLAVLFLYPITTQSEEERLQQENEKKEYNSRVYFMKQTVGNACGTIGLLHALGNLTSEVKLVEGSFFDNFFKSTASLDPLQRATFLENDKEMEVAHLVAATAGDTEASDNATAHFICFACVDDELYELDGRKSVPISHGPSSPSTLLRDAAKAIQSMIQKNPDSFNFNVIALCKKSG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02082 260 CDD Peptidase_C12_UCH_L1_L3 40 255 - -
Gma01g02082 260 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 35 258 IPR001578 GO:0004843|GO:0006511
Gma01g02082 260 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 35 258 - -
Gma01g02082 260 Gene3D - 34 258 IPR036959 GO:0004843|GO:0006511
Gma01g02082 260 Coils Coil 94 114 - -
Gma01g02082 260 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 40 241 IPR001578 GO:0004843|GO:0006511
Gma01g02082 260 SUPERFAMILY Cysteine proteinases 38 258 IPR038765 -
Gma01g02082 260 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 42 59 IPR001578 GO:0004843|GO:0006511
Gma01g02082 260 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 80 92 IPR001578 GO:0004843|GO:0006511
Gma01g02082 260 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 120 137 IPR001578 GO:0004843|GO:0006511
Gma01g02082 260 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 192 203 IPR001578 GO:0004843|GO:0006511
Gma01g02082 260 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 208 218 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02082 Gma-Chr1 56196464 56199855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02082 K05609 - gmx:100527755 458.759