Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02079 ATGATGCAGATCAGCTCCACCGTACCAGCCCACAACCTTCACAAGTTCCAAGCAATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAACAAGCTTCCTCTTCCACCTTTCAGAAGCCCTTCATCTCCACCGAGTCAACTCGCTTGCACCTCGCCAACCTCCACAAACTCCTCGAGACCCAGAAGCCCGAGGTCCCTCCACCCACCCAAATCCAACACCACCAGCCAATCATTAACGATCCAAAGGAAAAGAAAGGAAGAAGCTTTCTGGAGGGTCTCAACTTGGCCAGGCTATGGCCGGAGATGAAAGCCACCGATGAAATGTCCCCGCGCCACCTCAAACGCCTCCAGCGCCTCCTCTCCATGACGGCGGAGTATTCCCCGAGGAACATCCTCGGCGGCCGCTGGAGAGAATACCACGGCAGCAACGACTGGAAAGGGATGTTGGACCCTCTCGACGAGAATCTCCGGCGAGAGGTCGTCCGCTACGGCGAATTCGTCCAAGCCGCGTATCAAGCCTTCCATTCAGACCCCGCCATGTCAACGGAGGAGCCGCCACACACCCAACACGTGGCACTTCCCGATAGATCCTACCGAATGACCAAAAGCCTCTACGCCACGTCATCCATTGGTTTACCCAAATGGGTAGATGACGTGGCACCGGATCTAGGATGGATGACCCAACGATCAAGTTGGGTGGGATATGTAGCCGTTTGCGAGGACAGGAGAGAGATAACACGAATGGGAAGAAGAGACATTGTGATCTCTCTCAGGGGAACTTCCACGTGTCTAGAATGGGCAGAAAATCTCAGGGCTCATATGATTGACATGCCCGACAACGATAGCTCAGAAGAAGCCCAAGGAAAGCCCAAAGTGGAGTGTGGGTTCATGAGCTTGTACAAAACAAAAGGAGCACAAGTGCCAAGTCTAGCAGAATCCGTTGTAGAAGAAGTGAGGAGACTGATCGATCTATACAAAGGTGAAGAGTTGAGCATCAGTGTGATAGGGCACAGCCTTGGGGCGACGCTAGCCTTATTGGTGGCTGAGGAGATAAGCACGTGTTGCCCCCAAGTGCCACCCGTGGCTGTTTTTTCCTTCGGTGGGCCTCGCGTGGGTAACAAGGCCTTTGGGGATCGCTTAGCTGCCAAAAACGTCAAGGTGCTGAGAATAGTGAACTCGCAAGACGTGATTACTAGGGTTCCAGGGATCTTCGTGAGCGAAGAGCTTGAACAGAAAATACGGAACGTTGGTGGGGGTGTGTTGGAGGAGAACACGCCCTTAGCATACTCGCACGTGGGAACAGAGCTGCGTGTGCACACCAAGATGTCGCCATATCTTAAGCCCGATGCTGACATGGCGTGTTGTCATGACTTGGAGGCTTACTTGCACTTGGTGGATGGGTTCTTGGCCTCCAATTGTCCTTTCAGATCCAATGCTAAGAGAAGCTTGGCTAGGTTAATGCAAGACCAAAGTGCCAATGTAAAGAAGTTGTATACTAGCAAGGCAAAATCCCTCACTGTCAATCTTAGTAGGCAGGGATCTATGTCTATGTCTAATTGTTTGCCTAGTCCATCTTAA 1575 0.5219 MMQISSTVPAHNLHKFQAIRCPSFSFRCQQASSSTFQKPFISTESTRLHLANLHKLLETQKPEVPPPTQIQHHQPIINDPKEKKGRSFLEGLNLARLWPEMKATDEMSPRHLKRLQRLLSMTAEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHTQHVALPDRSYRMTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWVGYVAVCEDRREITRMGRRDIVISLRGTSTCLEWAENLRAHMIDMPDNDSSEEAQGKPKVECGFMSLYKTKGAQVPSLAESVVEEVRRLIDLYKGEELSISVIGHSLGATLALLVAEEISTCCPQVPPVAVFSFGGPRVGNKAFGDRLAAKNVKVLRIVNSQDVITRVPGIFVSEELEQKIRNVGGGVLEENTPLAYSHVGTELRVHTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRSNAKRSLARLMQDQSANVKKLYTSKAKSLTVNLSRQGSMSMSNCLPSPS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02079 524 SUPERFAMILY alpha/beta-Hydrolases 156 467 IPR029058 -
Gma01g02079 524 MobiDBLite consensus disorder prediction 63 83 - -
Gma01g02079 524 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 510 - -
Gma01g02079 524 CDD Lipase_3 155 465 - -
Gma01g02079 524 Pfam Lipase (class 3) 253 402 IPR002921 GO:0006629
Gma01g02079 524 Gene3D alpha/beta hydrolase 134 517 IPR029058 -
Gma01g02079 524 PANTHER GLYCEROLIPASE A1 2 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02079 Gma-Chr1 56162898 56164594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02079 26 524 Acyl Lipid Metabolism Gene Families AT4G16820 58.708 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02079 - - gmx:100806573 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02079 01 56162898 56164594 Gma11g00334 11 2705899 2707618 GST
Gma01g02079 01 56162898 56164594 Gma10g02406 10 51671003 51676346 PCT
Gma01g02079 01 56162898 56164594 Gma20g01302 20 39742992 39748324 PCT