Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02057 ATGGCGGAATCGTTTGAGCTTCCGAATCGGTTAGCAATCCTTCCTTTCAGGAACAAAGTCCTTTTGCCTGGCGCCATCATCCGAATTCGCTGCACTTCCCCCATCAGTGTAAAGTTGGTGGAACAAGAACTTTGGCAGCGAGAAGAGAAGGGGTTGATTGGCATCTTACCAGTACGTGATGCTGCTGCTGAAATTCAGCCCGCGGGTCCAGTTATATCTCACGGCAAAGGTACCGATTCTCTAGACCAAAACTCAAAAGTTCAAGGTGGTTCATCAGATTCTCAAAAGCTTGATGTGAAAAATCAGCATGATGTTGTTCATTGGCATAACAGGGGGGTAGCTGCTCGAGCACTACACTTATCAAGGGGAGTGGAGAAACCTAGTGGGAGAGTCACATATATTGTTGTTCTTGAAGGTCTGTGCAGATTTAGTGTCCAGGAACTAAGCACGAGAGGAACATACCATACTGCAAGGATATCATCCCTGGAGATGACTAAGACTGAGATGGAACAGGTGGAACAAGACCCAGATTTCATAACATTATCTCGCCAATTTAAAGCAACTGCCATGGAGCTTATTTCTGTTCTGGAGCAGAAACAAAAAACTGGTGGAAGGACGAAAGTTCTTTTGGAGACTGTTCCAGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAGCAGCTATCAATGTTGGATTCAGTTGACCCTAAAGTGAGGCTTTCAAAAGCAACAGAATTGGTTGATAGGCACTTACAGTCAATACTTGTAGCTGAGAAAATTACACAAAAGGTTGAAGGACAATTGTCAAAATCTCAAAAAGAATTTCTTCTTCGACAGCAGATGAGAGCTATAAAAGAGGAACTTGGTGATAATGATGATGACGAGGATGACCTGGCTGCCCTGGAAAGAAAGATGCAAAAGGCAGGAATGCCACAGAATATCTGGAAGCATGCTCACAAAGAATTAAGGAGACTCAAAAAAATGCAGCCTCAGCAACCAGGGTATAACAGTTCACGGGCTTACCTGGATCTTCTTGCTGATTTGCCATGGCAGAAGGCTAGCAAAGAGCTTGAACTGGACTTAAGGGCTGCACAGGAGCGCCTGGACACTGATCACTATGGTTTAGTGAAGGTCAAGCAACGGATAATTGAATACCTGGCTGTTCGCAAGCTTAAGCCAGATGCAAGGGGTCCAGTATTGTGCTTTGTTGGACCACCAGGTGTTGGAAAGACATCACTGGCATCCTCTATTGCTGCTGCTTTGGGCAGAAAATTTGTGCGCATATCCCTTGGTGGAGTCAAGGATGAGGCTGATATTAGAGGGCATAGGAGAACATACATTGGAAGCATGCCTGGGAGGCTTATAGATGGACTGAAGAGAGTAGCTGTTTGCAATCCTGTCATGTTGATTGATGAAATTGACAAGACAGGGTCCGATGTTCGTGGAGATCCAGCTTCTGCATTGCTAGAGGTTCTTGATCCGGAACAAAACAAAGCATTCAATGATCATTATTTGAATGTTCCATTTGATCTATCCAAGGTAATTTTTGTGGCTACAGCAAATAGAGCACAACCTATTCCTCCACCTCTCCTTGACAGGATGGAGGTCATTGAGCTTCCTGGATATACTGCTGAGGAAAAGCTCAAAATAGCGATGCAACATTTGATTCCAAGAGTTTTGGAGCAGCATGGGTTGAGTTCTGAGTTTCTTCAGATTCCAGAGGGGATGGTGCAACTGGTTATTCAGAGATATACTAGGGAAGCTGGTGTGCGCAATTTGGAAAGGAATCTAGCTGCCCTTGCTCGTGCTGCTGCAGTGAGAGTAGCAGAGCAAGAACAAGTAGTTCCACTAAACAAAGGGGTAGAGGGACTTTCCACCCCACTTCTGGAAAACAGACTTTCTGATGGTGCTGAAGTTGAAATGGAAGTGATACCTATGGGTGTCAACAATCGTGACATTTCAAACACATTCAGGATCACCTCTCCATTGGTTGTTGATGAAGCTATGCTTGAAAAAGTGCTTGGGCCTCCAAAATTTGATGGAAGAGAAGCTGAGGATCGTGTTGCTACCCCTGGGGCATCTGTTGGGCTTGTTTGGACTACTTTTGGTGGAGAAGTTCAATTTGTGGAGGCTACAGCAATGGTAGGGAAGGGTGAATTGCATCTTACTGGACAACTGGGTGATGTAATCAAAGAATCAGCTCAGATAGCACTAACATGGGTAAGGGCAAGAGCAACTGAACTTAGGCTAGCTGCTGCAGAAGGCATTAATCTGTTGGAGGGCCGTGATATACATATACATTTTCCTGCAGGTGCTGTACCCAAAGATGGGCCTTCGGCTGGTGTGACTTTGGTAACAGCATTGGTATCACTTTTCAGTCAGAGAAGAGTGAGATCGGATACAGCTATGACTGGGGAGATGACATTGAGGGGTCTTGTACTACCTGTTGGCGGTATCAAGGATAAGATATTAGCAGCACATCGATGTGGTATTAAGAGAGTCATCCTGCCTGAAAGGAACCTGAAGGACTTGGTTGAAGTACCATCATCAGTACTGGCCGATTTGGAGATACTGCTTGCAAAACGTATGGAAGACGTGCTAGAGCAAGCTTTTGACGGTGGGTGCCCTTGGAGACAACACTCAAAGTTGTAA 2670 0.4494 MAESFELPNRLAILPFRNKVLLPGAIIRIRCTSPISVKLVEQELWQREEKGLIGILPVRDAAAEIQPAGPVISHGKGTDSLDQNSKVQGGSSDSQKLDVKNQHDVVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMTKTEMEQVEQDPDFITLSRQFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLAALERKMQKAGMPQNIWKHAHKELRRLKKMQPQQPGYNSSRAYLDLLADLPWQKASKELELDLRAAQERLDTDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLIDEIDKTGSDVRGDPASALLEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTAEEKLKIAMQHLIPRVLEQHGLSSEFLQIPEGMVQLVIQRYTREAGVRNLERNLAALARAAAVRVAEQEQVVPLNKGVEGLSTPLLENRLSDGAEVEMEVIPMGVNNRDISNTFRITSPLVVDEAMLEKVLGPPKFDGREAEDRVATPGASVGLVWTTFGGEVQFVEATAMVGKGELHLTGQLGDVIKESAQIALTWVRARATELRLAAAEGINLLEGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQRRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVILPERNLKDLVEVPSSVLADLEILLAKRMEDVLEQAFDGGCPWRQHSKL 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02057 889 MobiDBLite consensus disorder prediction 69 98 - -
Gma01g02057 889 MobiDBLite consensus disorder prediction 77 96 - -
Gma01g02057 889 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 410 429 - -
Gma01g02057 889 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 697 713 - -
Gma01g02057 889 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 779 798 - -
Gma01g02057 889 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 809 828 - -
Gma01g02057 889 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 832 850 - -
Gma01g02057 889 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 889 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Gma01g02057 889 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 889 - -
Gma01g02057 889 Pfam ATPase family associated with various cellular activities (AAA) 406 543 IPR003959 GO:0005524|GO:0016887
Gma01g02057 889 Gene3D - 367 545 IPR027417 -
Gma01g02057 889 Coils Coil 290 310 - -
Gma01g02057 889 Gene3D - 306 354 - -
Gma01g02057 889 SUPERFAMILY Ribosomal protein S5 domain 2-like 697 876 IPR020568 -
Gma01g02057 889 TIGRFAM lon: endopeptidase La 13 877 IPR004815 GO:0004176|GO:0005524|GO:0006508
Gma01g02057 889 Pfam Lon protease (S16) C-terminal proteolytic domain 671 877 IPR008269 GO:0004176|GO:0004252|GO:0006508
Gma01g02057 889 SUPERFAMILY PUA domain-like 10 254 IPR015947 -
Gma01g02057 889 SMART AAA_5 402 547 IPR003593 -
Gma01g02057 889 Gene3D - 164 298 - -
Gma01g02057 889 CDD AAA 387 548 - -
Gma01g02057 889 ProSiteProfiles Lon proteolytic domain profile. 694 879 IPR008269 GO:0004176|GO:0004252|GO:0006508
Gma01g02057 889 Gene3D - 696 881 IPR014721 -
Gma01g02057 889 Gene3D - 2 163 IPR046336 -
Gma01g02057 889 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 889 IPR027501 GO:0004252|GO:0006515
Gma01g02057 889 PIRSF Lon_proteas 654 880 IPR004815 GO:0004176|GO:0005524|GO:0006508
Gma01g02057 889 PIRSF Lon_proteas 1 632 IPR004815 GO:0004176|GO:0005524|GO:0006508
Gma01g02057 889 Gene3D - 546 685 - -
Gma01g02057 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 620 IPR027417 -
Gma01g02057 889 ProSiteProfiles Lon N-terminal domain profile. 11 255 IPR003111 -
Gma01g02057 889 SMART lon_5 10 255 IPR003111 -
Gma01g02057 889 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 255 IPR003111 -
Gma01g02057 889 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 782 790 IPR008268 GO:0004176|GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02057 Gma-Chr1 55919035 55935702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02057 K01338 - gmx:100796650 1683.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02057 01 55919035 55935702 Gma01g02057 01 55919035 55935702 ECH