Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02044 atgacagtttcttctgagaatggcgtctcaagcggccagagttctctcaccggtcttgctccacttgaagctgtgctctttgatatagatggaacactttgtgattctgatccgctccactattatgccttccgtgaaatgcttctagagattggttttaatggaggtgttcctatatcagaggaattctttattgacactgttgctggcaaacacaatgatgatatagccttggttctctttcctggtgatctggaacgaggtttaaagtttgtggatgataaggaagccatgttccggagattggccgcagagcaactgaagcctttgaatggtcttgataaagtgaggaaatggattgaaaatcatgggctgaagagagctgcagttaccaatgctccaagagcaaatgcagaactcatgatctcaatacttggtctctcagatttcttcgacgctgttattattggtggtgaatgtgaacatgccaagcctcatccagacccctacctgaaaggtctcgaagctctgaaggcatcaaaggaccacacatttgtATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTTTAGCTACTCGAAACCCAGAAAATTTATTGATGGAAGCAAAACCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAGGCTACCAGTGCTCGTTCAGTTTGA 750 0.1093 MTVSSENGVSSGQSSLTGLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNGGVPISEEFFIDTVAGKHNDDIALVLFPGDLERGLKFVDDKEAMFRRLAAEQLKPLNGLDKVRKWIENHGLKRAAVTNAPRANAELMISILGLSDFFDAVIIGGECEHAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPENLLMEAKPAFLIKDYEDPKLWAALEELDKATSARSV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02044 249 Pfam Haloacid dehalogenase-like hydrolase 25 206 IPR041492 -
Gma01g02044 249 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 4 246 - -
Gma01g02044 249 Gene3D Putative phosphatase; domain 2 37 105 IPR023198 -
Gma01g02044 249 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 22 230 - -
Gma01g02044 249 SUPERFAMILY HAD-like 20 239 IPR036412 -
Gma01g02044 249 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 22 230 - -
Gma01g02044 249 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 4 246 - -
Gma01g02044 249 Gene3D - 23 231 IPR023214 -
Gma01g02044 249 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 206 IPR006439 -
Gma01g02044 249 CDD HAD_BPGM-like 24 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02044 Gma-Chr1 55826027 55829131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02044 - - gmx:100793483 493.812