Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01830 ATGGGGGATATTAGGCATTCACGGGTAGAGCAAGGTCAAACAAAGATTAAAAATGTTCCAATTGCTGTCACCCCTGAAGGGTTTTGGTGTTGCCCTACTCCTGTTGGGTTTCAGAAAAGCCTCAAGCCTCAAAACCCTTTGAATAAACTCAAACCCTCTTCACCACCCCCAAAGACCAGTTCCCAGAAAAAGGCTGTCTCAGTGAGTGAGAGAAAAACAGTGCCTGCCCCATCAAGATTGGTGGTTTCAGATGCTCAACAATGTAATGATGATCCAGAAAGACCTCCACCTAGCACTTCTGTGCCTGCACAGAGAACACCCAAGCCCAAACTTGAATCTTTGCCCAAAAAGGTAGCTATTGAGTTTGGTGAACCTGGAACTTGTGACATGAAGCTGCTTCTCCTTGGAAAGCAGGGATTTTGTGTGAAGTTAAGTGTGCACAGGGATGTTCTAATAGAGAAAAGTAGTTTCTTTGCTGATAAACTTTCTGAGCAATCTGGTTTATCATGTCTCCAAGTTGATGACTGTGAGGATGTTGAAATATATGTTGAGACTGTTGGACTTATGTACTGCAAAGAAATGAAACAGCGGCTAATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTCAAGGTCACAGAATTCCTTGGCTTCAGCTCATGTATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGAATGGAGAGGAAGAAGAAGAAAAGGTGATCTCAACCATCCTACGACTCCAAGGAGAAGGAATTGGGGTAAATCCGGTGCTAAAACGAGTTTCTCCTGATTTTTCTAATGCCCCAAAAGATACCCTCTCCCACATTGTTGAACTTGTTCTCAAAAGCAATGAGGAGAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTTAGGGAGAATAACAGTCTTCCAAGTTCTTCAGGCTCAGCTGACCTCTGTAATGACATGATTAATAAGTCATGCAGAAATTGCATGGATTCTTTATTGTGTCTGTTCAACCAGGTGGCAGAGCCAAGCTTTAGTGATAACAAAGAACCTGTAGTAAAACATATAGCTCTTGAAGCTGATAACTTGTCATGGTTGCTTGAGATTTTAGTTGACAAACAAGCTGCTGAAGATTTTGCGCTGATGTGGGCAAACCAGCAGGAATTGGCAGCCCTCCATGGAAAGCTTCCGATTGCATTTCGTTATCATGTCAGTTGCATTTCAGGAAGACTATATGTTGGCATTGGAAGAGGGGAGGTTTTGCCATCAAAGAACACGCGCCAGCTGTTGTTGCAGACATGGCTACAGCCTCTAATCAATGACTATAACTGGTTGCAGCACGGGTGCAGGTCATTTGATAGGAAACTTGTGGAGGAAGGAATTGGAAGGACAATTCTCACCTTGCCTTTGGAGGATCAGCAGAGTATTTTGCTTTCATGGGTTGGAAGTTTCTTGAAAACTGGTGATGGCTGTCCCAATCTTCAGAGAGCTTTTGAGGTGTGGTGGCGGAGGACTTTCATTAGGCCATATGTGGAAGGCCAAAGTAATGCCATGCCAGATAGTTGA 1569 0.4385 MGDIRHSRVEQGQTKIKNVPIAVTPEGFWCCPTPVGFQKSLKPQNPLNKLKPSSPPPKTSSQKKAVSVSERKTVPAPSRLVVSDAQQCNDDPERPPPSTSVPAQRTPKPKLESLPKKVAIEFGEPGTCDMKLLLLGKQGFCVKLSVHRDVLIEKSSFFADKLSEQSGLSCLQVDDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVTEFLGFSSCIQSCLEYLEAVPWNGEEEEEKVISTILRLQGEGIGVNPVLKRVSPDFSNAPKDTLSHIVELVLKSNEERGRREMKSIVLKLLRENNSLPSSSGSADLCNDMINKSCRNCMDSLLCLFNQVAEPSFSDNKEPVVKHIALEADNLSWLLEILVDKQAAEDFALMWANQQELAALHGKLPIAFRYHVSCISGRLYVGIGRGEVLPSKNTRQLLLQTWLQPLINDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEGQSNAMPDS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01830 522 PANTHER BTB/POZ DOMAIN PROTEIN 1 518 - -
Gma01g01830 522 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 518 IPR038920 -
Gma01g01830 522 MobiDBLite consensus disorder prediction 40 110 - -
Gma01g01830 522 MobiDBLite consensus disorder prediction 40 68 - -
Gma01g01830 522 Gene3D Potassium Channel Kv1.1; Chain A 122 249 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01830 Gma-Chr1 53927071 53931280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01830 - - gmx:100818853 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01830 01 53927071 53931280 Gma01g01830 01 53927071 53931280 ECH
Gma01g01830 01 53927071 53931280 Gma11g00571 11 4755675 4759363 GST
Gma01g01830 01 53927071 53931280 Gma16g01312 16 31833552 31839305 PCT
Gma01g01830 01 53927071 53931280 Gma02g00549 02 5497433 5501380 PCT
Gma16g01312 16 31833552 31839305 Gma01g01830 01 53927071 53931280 PCT
Gma02g00549 02 5497433 5501380 Gma01g01830 01 53927071 53931280 PCT