Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01817 ATGGGAGGGCAATCCAGCAAGATACCTAGCAATAGTGGTGTTCCAACACCAATCAAAATGGGTACCCATTCTCTGTATGCGGCTGATTTGAACTCTTATGAGGCTGCGTGTGTTGAAGATCCAAACTTGCAATCCTTAGATGCTACCATTCAGGAGCGCACCAACAGGGTGATCACCTCTCTTGCTAATGGGATTGAGGTTCGTTCCATATCCATCGAGTCACTAGGGGAAATGACTGGTAGTTTGCTTGAAATGAATCAGGATGTTGCCAAAGTCATTCTAGAGTGCCAGCAAGATATATGGAACAAGAAGGACAGAGAGCTGTTCTCCCTGGTGGAGGACTTCTTTGAAAATAGCCTCCAGACATTGAACTTCTGCAACGCTCTTGATAAATGCTTGAATCGAGCTCGCGGAAGGCATGTTATAGTTAAGTCTGCGATTACCTGTTTTGAGGAAGAGGTGCAAAATGGGGTTGAAGGGTCCACTTATTTGAAGACTTTGCAAGAGCTTAAGGGTTTCAAGGAAGCCGGGGACCCCTTTACTGAGGAGTTTTATTCCTTGTTTCAGTCAGTTTATCAACAGCAGGCATCAATGCTGAAGAAATTGAAAATTAGGAAGCAAAAGCTTGATAAGAAACTGAAGTCCTTCAAGACATTGAAGAGGGTGTCAAATGCCATTTTTGTGGCTGCTTTCGTGTCTGTTTTGATATTCTCAGTGGTCGCAGCTGCCATTGCTGCACCGCCTGTTGTAACTGCTTTGGCTGGTGCATTGGCTGTTCCAATAGGCTCAGTGGGGAAATGGTGTAACTCTCTGTTTAAGCGATATGAGACAGCTTTAAAGGGCCAAAGAGAACTAATCAGTTCTATGCAAGTTGGTAGTTACATTACATTGGTGGACTTGAAAAACATTCGTTTGCGCATCGACCAATTGGAAATAAAGATAGAGTCCATGTTGCAGAGTTCTGATTTTGCTCTTAGAAATGAGGATGCTGTAAAGTTTGCCATAGATGAGATTAAGAAGAATATAGACATTTTTGCAGAGACCATTGAGGCGTTGACTGAAAGTCCTTCGATGCAATTGAACATCCTCTGTGAGACTTTGACTGACTCTGAGATTGGGCAACAATAA 1128 0.4317 MGGQSSKIPSNSGVPTPIKMGTHSLYAADLNSYEAACVEDPNLQSLDATIQERTNRVITSLANGIEVRSISIESLGEMTGSLLEMNQDVAKVILECQQDIWNKKDRELFSLVEDFFENSLQTLNFCNALDKCLNRARGRHVIVKSAITCFEEEVQNGVEGSTYLKTLQELKGFKEAGDPFTEEFYSLFQSVYQQQASMLKKLKIRKQKLDKKLKSFKTLKRVSNAIFVAAFVSVLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKRYETALKGQRELISSMQVGSYITLVDLKNIRLRIDQLEIKIESMLQSSDFALRNEDAVKFAIDEIKKNIDIFAETIEALTESPSMQLNILCETLTDSEIGQQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01817 375 PANTHER UPF0496 PROTEIN 3-RELATED 1 354 IPR007749 -
Gma01g01817 375 Pfam Protein of unknown function (DUF677) 43 355 IPR007749 -
Gma01g01817 375 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 354 - -
Gma01g01817 375 Coils Coil 335 355 - -
Gma01g01817 375 Coils Coil 300 320 - -
Gma01g01817 375 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01817 Gma-Chr1 53767270 53768715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01817 - - gmx:102667785 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00584 11 4890138 4891515 Gma01g01817 01 53767270 53768715 ECH
Gma01g01817 01 53767270 53768715 Gma01g01817 01 53767270 53768715 ECH
Gma01g01817 01 53767270 53768715 Gma11g00584 11 4890138 4891515 GST