Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01812 ATGGTAACATCAAAGCCTCATGCAGCACTTATAGCAAGCCCCGGCATGGGGCACCTAATTCCCATGGTGGAGCTAGGCAAACGCCTCCTCACTCACCACTCCTTCCACGTCACCATCTTCGTCGTCACCACCGACTCCGCAATCACAACCTCTCACATACTCCAACAAACATCAAACCTCAACATCGTCCTTGTCCCTCCCATCGATGTCTCCCACAAACTACCACCCAACCCGCCCTTAGCAGCACGAATTCTGTTAACCATGCTCGACTCCATACCCTTTGTGCACTCTTCCATTCTGTCCACCAAGCTTCCTCCTCCTTCGGCACTCATCGTTGACATGTTCGGATTTGCAGCTTTTCCCATGGCACGTGACCTCGGCATGCTTATCTACGTTTACTTCGCCACCAGCGCCTGGTTCTCTGCGGTTACCGTATACGTTCCCGCCATGGACAAGAAAATGATTGAAAGCCACGCGGAAAACCACGAGCCGCTCGTGATTCTCGGTTGCGAAGCGGTTCGGTTCGATGACACGCTCGAACCGTTTTTATCGCCTATAGGGGAGATGTACCAGGGTTACCTTACAGCAGCAAAGGAGATAGTGACCGCTGATGGAATTTTGATGAACACGTGGCAAGATCTGGAGCCCGCTGCGACGAAGGCGGTGAGAGAGGACGGGATATTGGGCCGGTTTACGAAGGCGGAGGTGTATTCGGTTGGACCGCTGGTGAGAACCGTGGAGAAAAAACCGGAGGCTGCGGTTTTAAGTTGGCTGGACGGTCAACCGGCTGAGTCGGTGGTCTATGTGTCCTTCGGGAGCGGTGGGACAATGTCAGAGGTTCAAATGAGGGAAGTGGCGTTGGGCTTGGAGCTGAGTCAACAGAGGTTTGTTTGGGTGGTGCGGCCACCGTGCGAGGGCGACGCGAGTGGCTCGTTTTTTGAAGTATCGAATGGTGGTGACGTGGCGCTGAATTACTTGCCGGAGGGGTTCGTGAAAAGAACGGAAGCGGTGGGGGTTGTGGTCCCCATGTGGGCCCCGCAGGCGGAGATTCTGGGACATCCAGCGACGGGTGGTTTCGTGACGCACTGTGGTTGGAATTCTGTTTTGGAGAGCGTTCTGAACGGGGTTCCCATGGTGGCGTGGCCGCTTTACGCGGAGCAGAAAATGAACGCGTTTATGCTGTCGGAGGAGCTTGGGGTGGCGGTGCGGGTGGCGGAGGAGGGAGGAGTTGTGAGAAGAGAACAGGTAGCGGAGCTGGTGAGAAGAGTGATGGTGGATGAAGAAGGTTTTGGTATGAGGAAGAAGGTTAAGGAGCTGAAAGTGAGTGGAGAGAAAGCGTTGTCTAAGGTTGGATCCTCTCATCATTGGCTTTGTCAAATGAGCAAGGACTGTGAAGCTCATGTGCAGGGTTCTGAGGCTAAAGTTTCTTCTGCTTACACTACTACCACTGCTGTGCTCAGCGACGTCGGAACATTGTTGCAATTACTTTTGGCTTACTTGGGCAGCAGCTTGCATACAGAGATAACTTGGTCTCTTTCTCTTGAGGCTGCTCTTCGGACCTTTATGCAGCGTATGTCGTCTCTTGTTAGTTTTGCTTTCATCGAAAGAAAAAAAAATCCTTATCCTTATAATCTTATAGTTCTTTCGAATGGCTTAGTTTCATGA 1665 0.5243 MVTSKPHAALIASPGMGHLIPMVELGKRLLTHHSFHVTIFVVTTDSAITTSHILQQTSNLNIVLVPPIDVSHKLPPNPPLAARILLTMLDSIPFVHSSILSTKLPPPSALIVDMFGFAAFPMARDLGMLIYVYFATSAWFSAVTVYVPAMDKKMIESHAENHEPLVILGCEAVRFDDTLEPFLSPIGEMYQGYLTAAKEIVTADGILMNTWQDLEPAATKAVREDGILGRFTKAEVYSVGPLVRTVEKKPEAAVLSWLDGQPAESVVYVSFGSGGTMSEVQMREVALGLELSQQRFVWVVRPPCEGDASGSFFEVSNGGDVALNYLPEGFVKRTEAVGVVVPMWAPQAEILGHPATGGFVTHCGWNSVLESVLNGVPMVAWPLYAEQKMNAFMLSEELGVAVRVAEEGGVVRREQVAELVRRVMVDEEGFGMRKKVKELKVSGEKALSKVGSSHHWLCQMSKDCEAHVQGSEAKVSSAYTTTTAVLSDVGTLLQLLLAYLGSSLHTEITWSLSLEAALRTFMQRMSSLVSFAFIERKKNPYPYNLIVLSNGLVS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01812 554 Gene3D Glycogen Phosphorylase B; 7 453 - -
Gma01g01812 554 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 457 - -
Gma01g01812 554 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 406 IPR002213 GO:0008194
Gma01g01812 554 PANTHER GLYCOSYLTRANSFERASE 3 466 - -
Gma01g01812 554 Gene3D Glycogen Phosphorylase B; 252 448 - -
Gma01g01812 554 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Gma01g01812 554 PANTHER UDP-GLYCOSYLTRANSFERASE 72C1 3 466 - -
Gma01g01812 554 CDD GT1_Gtf-like 6 440 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01812 Gma-Chr1 53732237 53734705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01812 1 465 Glycosyltransferase AT3G50740 47.789 2.23e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01812 K12356 - gmx:100781979 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01812 01 53732237 53734705 Gma01g01812 01 53732237 53734705 ECH
Gma11g00591 11 4938609 4940198 Gma01g01812 01 53732237 53734705 ECH
Gma01g01812 01 53732237 53734705 Gma11g00591 11 4938609 4940198 GST