Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01811 ATGGAAGACACAGTTTCTGCGTTGAGGTCTTTGATGGTTTCTCACTCTCCGCCGCTGGATGCCTTAGTGGTGCCCTCTGAAGATTATCACCTGAGCGAATATGTGTCTGCACGAGACAAGCGCCGCGAATTCGTTTCCGGCTTCACTGGAAGTGCCGGCTTGGCACTTATAACAAAGAAAGAAGCACTGCTGTGGACGGATGGACGGTATTTTTTGCAGGCTGAGAAAGAACTTAGTGCTGGGTGGAAGCTAATGCGAATTGGTGAAGATCCTGCTGTAGATATCTGGATGGCCGATAATTTGCCAAAAGAAGCATCCGTTGGGGTTGATCCCTGGTGCATTTCAATTGATACTGCTCAAAGATGGGAGCGTGCTTTTGCCGAAAAACAGCAGAAGCTGGTTCCAACCTCAAAAAATTTGGTGGATGAAGTTTGGATAAATCGCCCACCGGCAGAGATAAATGCTGTTATTGTACATCCTGTGAAATTTGCAGGTCGCTCTGTTGCAGATAAGTTGAAAGATTTGAGAAAAAAGCTTGTACATGAGCAAACCCGTGGGATTATTTTCACAGCACTTGATGAAGTTGCATGGTTGTATAATATTCGTGGAAGTGATGTGGCCTACTGTCCTGTTGTTCATGCATTTGCTATTGTGACATCCAATTCTGCTTTCATTTATGTGGACAAACAAAAGGTTTCTGTTGAGGTACAAACTCATTTAGTGGAGAATGGAATTGAAATTCAAGAGTATACAGCCGTAAGCTCTGATGCGACATTGCTTGCAACTGATGAGCTAGATGCTGTATCTACTGCCAAGGCTGCTTTAGCCGAAACAGAGGCCAGAAAAATTCCCAGTGAAATTGATAAGAGTGTAAATGGTGAACATCAAGCAGAAGAAAATAGTAATGACCTCATATGGGCTGATCCAGTTTCATGCTGTTATGCACTGTATGCAAAGTTGAACCCCGATACAGTTCTCTTGCAGCAATCACCTTTAGCCCTTGCAAAAGCTTTAAAGAACTCGGTGGAGTTGGATGGGTTAAAAAAGGCACATATTCGGGATGGTGCAGCAGTTGTGCAATATCTTGTCTGGCTGGATAAGAAGATGCAGGATATTTATGGAGCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCAGCTATAATTCACTATTTTCCAAAGGCAGAAACATGTGCTGAACTTGATCCAGACAAAATTTATCTTTTTGATTCTGGAGCCCAGTATCTAGATGGAACAACAGATATTACACGAACAGTTCATTTTGGTAAACCTTCGACTCACGAAAAAGCGTGTTATACAGCAGTCCTAAAGGGTCACATTGCTCTTGGAAATGCTAGATTTCCCAATGGGACAAATGGGCATTCTCTTGATATTCTTGCCCGAATTCCTTTGTGGAAGGATGGTCTTGATTATCGACATGGTACTGGTCATGGAATTGGGTCCTATCTGAATGTTCATGAAGGACCTCACTTAATCAGTTTCAGACCTCAGGCTCGAAATGTACCATTGCAATCTTCAATGACTGTTACAGATGAACCTGGTTACTATGAGGATGGAGAGTTTGGGATAAGATTGGAGAATGTGCTTATTGTCAAGGAGGCTGATACAACTTTCAATTTTGGTGATAGAGGTTACTTATCTTTTGAACACATTACCTGGGCACCATATCAGACGAAGTTGATTGACCTGAACCTTCTAAGTCCCGAGGAGATAAATTGGCTGAACTCCTATCACGCCACATGTAGGAATATTCTGGCGCCATATTTGGATGAAGTTGAAAATGCATGGCTGAAGAAAGCCACTGAACCTGTAGGTGCATGA 1974 0.4245 MEDTVSALRSLMVSHSPPLDALVVPSEDYHLSEYVSARDKRREFVSGFTGSAGLALITKKEALLWTDGRYFLQAEKELSAGWKLMRIGEDPAVDIWMADNLPKEASVGVDPWCISIDTAQRWERAFAEKQQKLVPTSKNLVDEVWINRPPAEINAVIVHPVKFAGRSVADKLKDLRKKLVHEQTRGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFIYVDKQKVSVEVQTHLVENGIEIQEYTAVSSDATLLATDELDAVSTAKAALAETEARKIPSEIDKSVNGEHQAEENSNDLIWADPVSCCYALYAKLNPDTVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKKMQDIYGASGYFLEKDSVKKEKHLQSLKLTEVTVSDQLEGFRASKEHFKGLSFPTISSVGSNAAIIHYFPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEADTTFNFGDRGYLSFEHITWAPYQTKLIDLNLLSPEEINWLNSYHATCRNILAPYLDEVENAWLKKATEPVGA 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01811 657 PANTHER AMINOPEPTIDASE P1 2 655 - -
Gma01g01811 657 Pfam C-terminal region of peptidase_M24 596 654 IPR032416 -
Gma01g01811 657 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 524 536 IPR001131 -
Gma01g01811 657 Gene3D Creatinase/methionine aminopeptidase superfamily 337 655 IPR036005 -
Gma01g01811 657 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Gma01g01811 657 Pfam Creatinase/Prolidase N-terminal domain 6 142 IPR000587 GO:0016787
Gma01g01811 657 PANTHER XAA-PRO AMINOPEPTIDASE 1 2 655 - -
Gma01g01811 657 Gene3D - 1 145 IPR029149 -
Gma01g01811 657 SUPERFAMILY Creatinase/aminopeptidase 340 621 IPR036005 -
Gma01g01811 657 CDD APP 346 592 IPR033740 GO:0070006
Gma01g01811 657 Pfam Metallopeptidase family M24 348 584 IPR000994 -
Gma01g01811 657 SUPERFAMILY Creatinase/prolidase N-terminal domain 40 132 IPR029149 -
Gma01g01811 657 Gene3D - 146 335 IPR029149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01811 Gma-Chr1 53718538 53726388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01811 K01262 - gmx:100810683 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01811 01 53718538 53726388 Gma01g01811 01 53718538 53726388 ECH
Gma01g01811 01 53718538 53726388 Gma11g00592 11 4950526 4957153 GST