Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01750 ATGGTTAAGAAGACAGTGTTGAAGGTTGACATCAGTTGTCTCAAATGCAAAAGGAAGCTCCTCAAAATTGTCTCTTCCCTTCAAGGGGTGGATAAAATTGAAGCTGATGAAGGAAAGGGTACGTTGACCGTGACAGGGGATGCAGACCCATATGAAATAATAGTTCGCATAAGGAAAGCTGGCAAACATGCTGAAGTTGTGAGTGTTGGGCCTCCCCGGGACCCTCCAGTATGGCATCGTTTGGGCCTCATACAGATTGATGAATCGGTTCTAGAAACAACAGCATGA 288 0.4549 MVKKTVLKVDISCLKCKRKLLKIVSSLQGVDKIEADEGKGTLTVTGDADPYEIIVRIRKAGKHAEVVSVGPPRDPPVWHRLGLIQIDESVLETTA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01750 95 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
Gma01g01750 95 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 76 - -
Gma01g01750 95 CDD HMA 6 65 IPR006121 GO:0046872
Gma01g01750 95 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Gma01g01750 95 Gene3D - 1 74 - -
Gma01g01750 95 ProSiteProfiles Heavy-metal-associated domain profile. 11 66 IPR006121 GO:0046872
Gma01g01750 95 PANTHER OS04G0661100 PROTEIN 2 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01750 Gma-Chr1 53178193 53179226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01750 - - gmx:100796373 144.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01750 01 53178193 53179226 Gma01g01750 01 53178193 53179226 ECH
Gma01g01750 01 53178193 53179226 Gma11g00654 11 5417398 5418329 GST
Gma01g01750 01 53178193 53179226 Gma11g00186 11 1458378 1459130 GST