Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01727 ATGGCGGCGGCGACGTCGTATCTGACGGGGACGCAGAGGTACGCTGCCGGAGCGTTGTTTGGGCTGGCTCTGCACCAGGCCCAACTTCACCAGACCCACCCTCTGGGCCTATCAACCGACGACTTCCCTTCTGATTCTGAAACTAGTTCCACTCTCGCTGTTTCCGAACACCCCAACCTTTGGGTCCATCACAACTCCGGTTTGCTCCGCCCCGTTTTAAAGTACCTAGATATTAATTCCGCAGCATGGTCTGGACTCGAGGAAACTGCTGGCTTTTCTTCGGCTTCACGTCACGTCGGTCCGTTCTTGAGACTATTATCAGAAGATTTTGATGATGATGATGATGATTCTTCCCAAAGGTTGGATCAAGAACTTGCTTTGTCAGAAGCTGTTGATGCTATGGTACATAGCCTGGAAAAGAATTCTGAGTCTCTCGTGTCTAGAAGGGAGAAGTTACGTGAATATGAGAATCAATGTCGTGAAAAGTTTTCGACTGCTGATGTTCAACCGAATTCTGAGAAGGTAAATTTGCAATTGGAAACCCAGGAGGATACAGGTACTCCTTTCCTTGACTGTGAAGACTCACATCAGGGATCTTTTGATAGTAATATTGATGAGATTCCAACTGAAGAGGTAATGATTCTCAGCTATCCGAGGAAAGTGACAGTGCTCTACGAGCTTCTCTCTGCCTGCCTATCAGATTTAGGTGAAAATAACAAGAAATATAGCCGGAGGAGAAAGGGCTACGATGCTCGACAACGTGTCACTCTACGCCTGCTGGCAACTTGGCTTGATATCAAGTGGGCAAAAATGGAGGCCATTGAGACAATAGTTGCTAGTTCTGCAATGTCTTTCATTAAAGAGCAAGAGGCAAGTAAAGAAGAAACTCAATCAAAAGAAGACAAGTGGGCTAAATGGAAGAGGGGTGGTATCATTGGTGCTGCTGCCTTAACTGGGGGAACTTTGATGGCTGTTACTGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGGCTTGGTGCTTTGGCTCCAACCTTGGGTACTCTGATCCCCGTAATTGGAGCAAGTGGATTtgctgcagctgctagtgctgctggaactgttgctggttctgttgctgttgctgcATCATTTGGAGCTGCTGGAGCTGGACTCACTGGAAGTAAAATGGCTAGAAGAGTTGGGGATGTTGAGGAGTTTGAATTCAAAGCTGTAGGAGAAAACCATAACCAAGGTAGGCTTGGTGTTGAGATCATGATCTCTGGATTTGTCTTTGAGGATGACAATTTTATAAGGCCGTGGGAAGGACTGGATGACAACTTGGAGAGGTATGCACTGAAGTGGGAGTCCAAGAATCTATTTGCCCTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAATTGCAACAGAGCTGATGAAGCAAGGGGCAATGATGACGGTTTTGCATGCTCTTTTAACTGCATTGGCTTGGCCAGCTGCATTACTTGCTGCAACTGAGTTCATAGACAGCACATGGACAATTGCTATCGACAGATCAGACAAGGCAGGAAAGTTGCTTGCTGAAGTATTATTGGGAGGGTTGCAGGGAAATAGGCCTGTTACCCTTGTAGGTTACTCACTTGGGGCTAGAGTTATTTTCAAGTGTCTGGAGTTTTTGGCTGAAACAGAAAACAGTGCTGAACTGGTAGAGAGAGTTGTTCTTCTTGGAGCACCCATTGCAATCAAGGACGAGAATTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGATTTGTCAATGCTTATTCAAGAAATGACTGGATGCTTGGAGTTGCTTTCCGCGCCAGTCTACTTTCACAAGGATTAGCTGGAATCCAACCTGTCGATATTCCTGGGATCCAAAATGTTGACGTGACAGATCATATAGAGGGTCATTCTTCATATTTGTGGGCTACACAACAGGTCCTAGATGAACTTGAATTAGATACCTATTATCCCGTTTATAACAAATTCCTTTCCAGACAGTGA 2004 0.4451 MAAATSYLTGTQRYAAGALFGLALHQAQLHQTHPLGLSTDDFPSDSETSSTLAVSEHPNLWVHHNSGLLRPVLKYLDINSAAWSGLEETAGFSSASRHVGPFLRLLSEDFDDDDDDSSQRLDQELALSEAVDAMVHSLEKNSESLVSRREKLREYENQCREKFSTADVQPNSEKVNLQLETQEDTGTPFLDCEDSHQGSFDSNIDEIPTEEVMILSYPRKVTVLYELLSACLSDLGENNKKYSRRRKGYDARQRVTLRLLATWLDIKWAKMEAIETIVASSAMSFIKEQEASKEETQSKEDKWAKWKRGGIIGAAALTGGTLMAVTGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRVGDVEEFEFKAVGENHNQGRLGVEIMISGFVFEDDNFIRPWEGLDDNLERYALKWESKNLFALSTAIQDWLTSRIATELMKQGAMMTVLHALLTALAWPAALLAATEFIDSTWTIAIDRSDKAGKLLAEVLLGGLQGNRPVTLVGYSLGARVIFKCLEFLAETENSAELVERVVLLGAPIAIKDENWEAARKMVAGRFVNAYSRNDWMLGVAFRASLLSQGLAGIQPVDIPGIQNVDVTDHIEGHSSYLWATQQVLDELELDTYYPVYNKFLSRQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01727 667 Pfam Protein of unknown function (DUF726) 305 653 IPR007941 -
Gma01g01727 667 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 4 662 IPR007941 -
Gma01g01727 667 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 4 662 - -
Gma01g01727 667 Coils Coil 138 158 - -
Gma01g01727 667 Gene3D alpha/beta hydrolase 458 653 IPR029058 -
Gma01g01727 667 SUPERFAMILY alpha/beta-Hydrolases 526 612 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01727 Gma-Chr1 52946572 52952784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01727 - - gmx:100782894 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01727 01 52946572 52952784 Gma01g01727 01 52946572 52952784 ECH