Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01712 ATGGAGAACACCGAGGGATCCGGATCTGCGACGAACGGGGTGCTGGCTCCGCCGCGCAAGGTGGCATTGATAACCGGAATTACCGGACAAGACGGTTCGTACCTGACGGAATTCCTCCTGGACAAGGGGTACGAGGTGCACGGCCTGATCCGCCGCTCGTCGAACTTCAACACGCAGCGCATCGACCACATATACGTGGATCCCCACAACGCCCACAAGGCCCGCATGAAGCTCCACTACGCCGATCTCTCCGACGCCTCCTCCCTCCGCCGCTGGCTCGACACCATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCATTCGAGATCCCCGACTACACCGCCGACGTCGTCGCCACCGGCGCCCTCCGCCTCCTCGAGGCCGTCCGCTCCCACATCTCCGCCTCCGGCCGCTCCCAcATCCGCTACTACCAAGCCGGCTCCTCCGAGATGTTCGGCGCCACCCCTCCGCCGCAATCGGAAACCACCCCCTTCCACCCCCGCTCCCCCTACGCCGCCTCCAAATGCGCCGCCCACTGGTACACCGTGAACTACCGCGAGGCCTACTCCCTCTTCGCCTGCAACGGCATCCTCTTCAACCACGAGTCCCCCCGCCGCGGCGAGAATTTCGTGACCCGCAAGATCACGCGGGCCGTGGGCCGCATCAAGGTCGGGCTCCAGAGCAAGCTCTTCTTGGGCAACCTGCAGGCCTCGCGAGACTGGGGCTTCGCTGGGGACTACGTGGAAGCCATGTGGCTGATGCTGCAGCAGGATAAGCCCGATGACTATGTTGTGGCCACCGAAGAGTCCCACACCGTCGAGGAGTTCTTGGAAGTCGCGTTCGGCTATGTGGGACTCAATTGGAGGGACCATGTCGTCATTGACAAGAGGTACTTTCGCCCCGCCGAGGTCGATAACCTCAAAGGGGACGCTTCCAAGGCCAAGAAGGTGCTTGGTTGGAAGCCCAAGGTTGGGTTTGAGCAGCTTGTCAAGATGATGGTTGACCAGGACATTGAGATGGCTAAGAAGGAGAAGGTTCTTGTTGATGCTGGCTACATTGATGCTCAGCAACAACCTTGA 1098 0.6166 MENTEGSGSATNGVLAPPRKVALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRIDHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHISASGRSHIRYYQAGSSEMFGATPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYSLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQDKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPKVGFEQLVKMMVDQDIEMAKKEKVLVDAGYIDAQQQP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01712 365 Gene3D - 23 329 - -
Gma01g01712 365 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 10 360 - -
Gma01g01712 365 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 345 IPR036291 -
Gma01g01712 365 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 10 360 IPR006368 GO:0008446|GO:0019673
Gma01g01712 365 CDD GDP_MD_SDR_e 21 345 - -
Gma01g01712 365 Hamap GDP-mannose 4,6-dehydratase [gmd]. 20 349 IPR006368 GO:0008446|GO:0019673
Gma01g01712 365 Pfam GDP-mannose 4,6 dehydratase 23 339 IPR016040 -
Gma01g01712 365 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 20 346 IPR006368 GO:0008446|GO:0019673
Gma01g01712 365 Gene3D - 213 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01712 Gma-Chr1 52808706 52810167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01712 23 205 Miscellaneous Gene Families AT4G12250 29.016 2.54e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01712 K01711 - gmx:100777692 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01712 01 52808706 52810167 Gma01g01712 01 52808706 52810167 ECH