Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01709 ATGGACCGCCGGGGTTGGCTATGGAAGAAAAGATCATCCGATAAAAACATAAAGGTTGAGAATGAGAAACCAGTGTCTACTTCTGAATTTGTTGGTCCTACCTTGTTTTCTGTGGCACATGTAGGAGATCAGCAAGACAGCAGCAAAAATAAGAACTATGTTCAAATAACAATGGAATCATACGCACATATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAAGTAAAAGCTTTGGAAGAAAAGCTATCTGCAGTTTATTCAGAATTAAATAACAAGGATGATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAATCTCAGGTTGGGAGAAAGCTGATGCCGAAGTTGTTTCCTTAAGATGTCAACTTGAATCTTTGTCTCTCTCTAAGCTTACTGTTGATGAGAAAGCTGCTCACCTAGATGAAGCCCTAAAAGAGTGCATGAAGCAGATAAGAACAGTAAAGGAAGAAAGTGACCAGAAACTGCAGGAGGTAATTCTTATGAAATCTCATCAGTGGGAGAAAATCAAGTTAGAACTTGAAGCACAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAATGAAAATGCTGCCCTTCTAAAATCAGTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAGAAGTCTGAAGCAGAGGCAGAGGTAGAGCATCTAGAGAAGAGTGTTCAATCAAAAGAAAAAGAAATAACTTCACTAAAGTATGAGCTGCACATGATTTCTAAGGAGCTGGATATCCGTAATGAAGAGAAGAATATGATTATGAGATCGGCAGAAGTGGCAAACAAGCAACACACTGAGGATGTCAAGAACATCACCAAGCTAGAAAGTGAGTGCCAACGACTTCGTGGTCTTTTGAGAAAAAAGTTACCTGGGCCTGCTGCATTGGCACAAATGAAGTTAGAAGTTGAGAGTTCACACCATGTCTTCAGTGCAACCCATCTGAGAAAAACTAGTTCAAAAACTGATAGCCTGCAAGAATCCGAGTTTCTTACCAAACAGTTGAAGGTGTTGGAAGAAGAAACAAAGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAGAAACTTGTATGCTAAAACGGTTGGCAGGCTTAAGTGCTTGGAAGCAGAGATGCATCAAGAAAGAAACGCCCAGAAAGCAATTTTGGCAACCAATTATGGAAACTCCTTCAGTAGAGTTTATAGCTATCCACCAACCATCACTTCTATCCCTGACAATGGGCATGAGGATTCAGAAAGTCCTGTTGAGTCAAGTGCAGCATCAATTCCTGACCATTCTGATATCAGGAGGATTGGAAGTGTAGGTAAATTTGAGAATCATAAGACTGAAACTATCTCAGAACTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTTGCATCATTAGTAAAGCTAATGATGATGCTGAAGATAAAAAGGAGACTAGCTGTTTATCTTCAAATAAAAATTGTTTTGATGGGACAAACCAAACAATAGAACCTGAGGCAGCTGAATATGATGAGCATATGCAAGATCTTAAGGAAAAAAGGATGATGTTAGAGGAAAACATGCAGCTTCTAGAAGAACTGAAAGCACAATTGGTGTCGTCTAATAAATCATGTAGTTTAGCTGAGATTCAGCTGAAATGCATGACTGAGTCTTACAAGTCACTTCAAACACGTGTAGAGGAGTTAGAAGCTGAAAATAAGTATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGTCATCGTGATGCTTTGGTGAGGTACAGAGAAATTAAAGAGAAAATGCAAAGGGACAAGTGCTTGGTGTGTGCAGCAAATTCGGTGGCAAATTCTGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGTCAGGAAACTCTGTCTATACTTGGTAGGCAATTGCAAGCTATGTGCCCTCAGATAGGGGTAACCATGACTCATCATAGTAAAAGGCTTCAAATGAATGAAAAGTTAGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGGTCATGTAACTCAAATGAAATTGATCATGCTGAGGCATGTAGCATAGTGTCTGACATTCAAGGAGTGACTGATGAGTTTTCATCGCATAACTCTGGTGCCACATCATGTCTTTCAGACACCGAAGGCAACTTTTGGTTAAACACTTGA 2265 0.3969 MDRRGWLWKKRSSDKNIKVENEKPVSTSEFVGPTLFSVAHVGDQQDSSKNKNYVQITMESYAHMSGLEDQVVNLEDQVKALEEKLSAVYSELNNKDDLVKQHAKVAEEAISGWEKADAEVVSLRCQLESLSLSKLTVDEKAAHLDEALKECMKQIRTVKEESDQKLQEVILMKSHQWEKIKLELEAQIDNLDEGLRELANENAALLKSVQESSNKIVKLKEEKSEAEAEVEHLEKSVQSKEKEITSLKYELHMISKELDIRNEEKNMIMRSAEVANKQHTEDVKNITKLESECQRLRGLLRKKLPGPAALAQMKLEVESSHHVFSATHLRKTSSKTDSLQESEFLTKQLKVLEEETKTLKEALASSNAELQASRNLYAKTVGRLKCLEAEMHQERNAQKAILATNYGNSFSRVYSYPPTITSIPDNGHEDSESPVESSAASIPDHSDIRRIGSVGKFENHKTETISELMDDFLEVEKMACLSDNGGVPLCIISKANDDAEDKKETSCLSSNKNCFDGTNQTIEPEAAEYDEHMQDLKEKRMMLEENMQLLEELKAQLVSSNKSCSLAEIQLKCMTESYKSLQTRVEELEAENKYLKEKMDELKNDLAEEKQSHRDALVRYREIKEKMQRDKCLVCAANSVANSGKDKELAAAEKKLAECQETLSILGRQLQAMCPQIGVTMTHHSKRLQMNEKLAKPTYGWSNSYGSCNSNEIDHAEACSIVSDIQGVTDEFSSHNSGATSCLSDTEGNFWLNT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01709 754 SUPERFAMILY Tropomyosin 65 263 - -
Gma01g01709 754 Coils Coil 141 168 - -
Gma01g01709 754 Coils Coil 181 250 - -
Gma01g01709 754 MobiDBLite consensus disorder prediction 421 444 - -
Gma01g01709 754 Coils Coil 64 91 - -
Gma01g01709 754 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 754 - -
Gma01g01709 754 Coils Coil 335 369 - -
Gma01g01709 754 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 754 - -
Gma01g01709 754 Coils Coil 571 619 - -
Gma01g01709 754 MobiDBLite consensus disorder prediction 421 440 - -
Gma01g01709 754 Pfam Filament-like plant protein, long coiled-coil 514 676 IPR008587 -
Gma01g01709 754 Pfam Filament-like plant protein, long coiled-coil 95 512 IPR008587 -
Gma01g01709 754 Coils Coil 526 563 - -
Gma01g01709 754 Coils Coil 642 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01709 Gma-Chr1 52786770 52791193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01709 - - gmx:100809230 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01709 01 52786770 52791193 Gma01g01709 01 52786770 52791193 ECH
Gma11g00692 11 5782550 5785825 Gma01g01709 01 52786770 52791193 ECH