Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01685 ATGGCTTCTCAAAACCCTAATCAGAGAAATTCTCTGTATCCACAAGTAATCGATTCTAACCCCGATGCTCCGCCGCCACTCCTTAATCCCAATCGTTCATCCTCTTCGCAACCCAGCCTCTACCCTTCCGTTGACTACAACGACCTCGTCCAAAACCTATTCCCTGAGGATGCCACCGCCGCCGGATCCCCCTCCGCGCCACTGGAGGCCACCGAGGAGGCCCTCCTCCGGATCCCCGGCGCGATCCTCAACCTCATCGACAAGGACTACAGCGTCGAGCTCGCGTGCGGCGACTTCTCCGTGATCCGCCTCCGGCAGGGCGACAACGCCGTCGCCGTGTACGCGCGCGTCGCCGACGAGATCCAATGGCCGCTCGCGAAGGACGCCACCACCGTGAAAGTCGATGATTCGCACTACTTCTTCTCCTTCCGCGTCCCCAAGGGTTCCGATCCCGGCGAGGAGGAAGAAGATATGCTCAGCTACGGCTTAACGATCGCGTCGAAGGGGCAGGAGGGATTACTGAAGGAACTCGACGTGGTTTTGGAGAACTGCAGTTGTTTCTCCGTGCAGAGTGTTTCGGAGAATGTCAAGAAGAAAGGGGAGGCGCTGGATGGTTCCGTGGCGAGGGAGGTTTCGCCGAAGGATTTGGAGTCGGGGAAGAAGAAGGAGATGATGGAGGGGCGGTGCGCGGCGTATTGGACGACGTTGGCGCCCAATGTGGAGGATTACAGTGGAAAAACTGCGAAGATGATTGCTGCAGGGTCTGGACATGTGGTTAAGGGGATATTGTGGTGTGGGGATGTGACCGTGGACAGGTTGAAATGGGGGAATCAGGTTATGAAGAAGAGGATCGCTCCTGGCTCGCATGCTGAGGTTAGTCCTCAGACATTGAAGCGGATTAAAAGGGTTAAGAGAGTTACTAAAATGACTGAGAAAGTAGCAAATGGTTTTCTCTCTGGGGTCGTGAAAGTGTCTGGATTTTTCACCAGTTCAGTGATAAACTCAAAAGCCGGAAAGAAATTTTTCAGCTTTCTACCGGGGGAAGTTCTGCTTGCATCGTTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTAGCTGGAAAAAATGTCATGTCAACATCATCAACTGTGACAACTGAGCTTGTCGATCACAGATATGGAGAACAAGCAGCTGAAGCAACAAGTGAAGGGTTTAGTGCTGCTGGTCATGCTTTGGGTACTGCATGGGCTGCTTTTAAGATTAGGAAGGCTCTCAACCCTAAGAGTGTTCTTAAACCTACCTCCCTGGCCAAAGCTGGTGCTAAAGCTGCAGCTTCTGAATTTAAGGCTAAAAGTTCCAAGTAA 1347 0.5249 MASQNPNQRNSLYPQVIDSNPDAPPPLLNPNRSSSSQPSLYPSVDYNDLVQNLFPEDATAAGSPSAPLEATEEALLRIPGAILNLIDKDYSVELACGDFSVIRLRQGDNAVAVYARVADEIQWPLAKDATTVKVDDSHYFFSFRVPKGSDPGEEEEDMLSYGLTIASKGQEGLLKELDVVLENCSCFSVQSVSENVKKKGEALDGSVAREVSPKDLESGKKKEMMEGRCAAYWTTLAPNVEDYSGKTAKMIAAGSGHVVKGILWCGDVTVDRLKWGNQVMKKRIAPGSHAEVSPQTLKRIKRVKRVTKMTEKVANGFLSGVVKVSGFFTSSVINSKAGKKFFSFLPGEVLLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGFSAAGHALGTAWAAFKIRKALNPKSVLKPTSLAKAGAKAAASEFKAKSSK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01685 448 PANTHER SPARTIN 155 448 IPR045036 -
Gma01g01685 448 PANTHER SPARTIN 1 149 IPR045036 -
Gma01g01685 448 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 155 448 - -
Gma01g01685 448 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 149 - -
Gma01g01685 448 MobiDBLite consensus disorder prediction 1 41 - -
Gma01g01685 448 MobiDBLite consensus disorder prediction 1 17 - -
Gma01g01685 448 Pfam Senescence domain 249 435 IPR009686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01685 Gma-Chr1 52518516 52523580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01685 K19366 - gmx:100804971 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01685 01 52518516 52523580 Gma01g01685 01 52518516 52523580 ECH