Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01681 ATGGGTTGCTGCCACTCCAAAATAGAGAGGGAAGAAACGGTGTCGCGTTGCAAAGCCAGAAAGCGTTACATGAAGCAGTTCGTGCAAGCAAGACACGCTTTTTCCGCTGCACATGTTATGTACATTCGCTCCCTTCGCGCCACTGGTTCTGCACTCTTTCAGTTCGCAAATGCCGAAACCACCGTCCTCCACCACCACCTTCCGTCGCGCCCTCATCCCATTCTCCCGCCGCCGCCGCCTAGAACCCCCACCCCGATGCCGCCGCCACCTCCTCCTCCGATGAGCCCTAGTTCCTACACGTGGACGTCGGACACCACCTCCTCTCCCGCCCTTCCTCAGCCGCCGCCGCCTCCTCCTCCTCCGGTGGCGTCCTCCGCCTGGGACTTCTGGGACCCGTTCATGCCTGTGGTGGCTTCCCGGTTGGCAACGGAGGAGGAGTGGGAGGCGACGACCACCACGGGATCGGAGGTGGTGGTGATGGCGGCGGCGAGCGTGACGGCGCCTCCGTCTGTGGTGAGCGGGTTTTCCAAAGAGACACCTAGTGAGCTTGCAATGGTGGTGTCAAGGAACAGTACTAAGGATCTTGTTGAAGTTATCAAAGAGCTTGATGACTATTTTCTCAAAGCTGCTGATGCTGGTTCTCATGTTTCTTTGCTCCTTGAAGTTCCAAACTCTGGATTTTCTGATAACAGTAAAGCATGTAAAGTGCACAGCTATGGGTGGAGTTTGAGTCCATCATTGTGGGCTTGGGGTTCGAGTCCGAAGCTGAATGGTGGTGCTTTTGGGGTTAATGGAGTTGGAAGTGTTGGGCACTGTTCCACGGTGGAGAGGCTATATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGAATGCTAAGACTATAAAGATGGAGCATGAGAAGAAGCTGGCACTCCTAAGGAAGGTGGAGATGAAGAGAGCTGACTATGTGAAGACAGAGAAGACAAAGAAAGGAGTGGAGAAATTAGAGTCACAAATGATGGTTGCTTCTCAGGCCATTGATAGTACATCTGCTGAAATCATCAAATTAAGGGAGGTAGAGCTCTACCCTCAACTCATTGAGCTTGTAAAAGGATTAATGTGCATGTGGAGAAGCATGTACGAATGCCATCAAGTACAGAAGCACATAGTTCAGCAGCTAGAGTACCTCAATACCATACCATCAAACAACCCCACATCTGAGATTCACAGGCAATCAACTCTTCAGCTGGAGCTCGAAGTAAAGCAATGGCACCAGTCCTTCTGCAACCTCTTCAAGGCCCACCGCGATTACATCCAATCCCTCACAGGTTGGCTAAGGTTCACCCTTTTCCAGTTCAGCAAAAACCCTCTAAGCCGAACCCCCGAGGAGTCAAAGATATACTCCCTCTGTGAAGAATGGCACCTCGCCGTTGACCGCATTCCAGACAAGGTAGCATCCGAAGGAATAAAAAGCTTGTTGACAGTTATTCATGCCATTGTAGTGCAACAGGCAGAGGAGCAAAAACAGAAGAAGAGGTCAGATTCCGCATTCAAAGAGCTCGAGAAGAAGGTGGTTCAGCTTCGGTCCTTGGAGTGCAAGTATGGTCCATACTCCATGCCGGAATCCTACGGTTCCATGAGAACCAAGGACCCTGTGACCGAGAAGCGCGCCAAGGTGGATGCCTTGAGAACAAAGGCAGAGGAAGAGAAGAGCAAATATGAGAAGTCAGTGAGTGTAACGCGGGCAATGACGCTGAACAACTTGCAAATGGGTTGCCCTCATGTGTTTCAAGGGATTGTTGGGTTTTCAAGTGTGTGCATGGAAGTTTTTGAGTCTGTATACAACAAAGCCAAAGCTGCTGAACAGGAGCATGACGTGAAGAGAATATTACCATAG 1878 0.508 MGCCHSKIEREETVSRCKARKRYMKQFVQARHAFSAAHVMYIRSLRATGSALFQFANAETTVLHHHLPSRPHPILPPPPPRTPTPMPPPPPPPMSPSSYTWTSDTTSSPALPQPPPPPPPPVASSAWDFWDPFMPVVASRLATEEEWEATTTTGSEVVVMAAASVTAPPSVVSGFSKETPSELAMVVSRNSTKDLVEVIKELDDYFLKAADAGSHVSLLLEVPNSGFSDNSKACKVHSYGWSLSPSLWAWGSSPKLNGGAFGVNGVGSVGHCSTVERLYAWEKKLYQEVKNAKTIKMEHEKKLALLRKVEMKRADYVKTEKTKKGVEKLESQMMVASQAIDSTSAEIIKLREVELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVKQWHQSFCNLFKAHRDYIQSLTGWLRFTLFQFSKNPLSRTPEESKIYSLCEEWHLAVDRIPDKVASEGIKSLLTVIHAIVVQQAEEQKQKKRSDSAFKELEKKVVQLRSLECKYGPYSMPESYGSMRTKDPVTEKRAKVDALRTKAEEEKSKYEKSVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFESVYNKAKAAEQEHDVKRILP 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01681 625 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Gma01g01681 625 PANTHER UNCHARACTERIZED 1 610 - -
Gma01g01681 625 Coils Coil 546 566 - -
Gma01g01681 625 MobiDBLite consensus disorder prediction 83 97 - -
Gma01g01681 625 Pfam Protein of unknown function (DUF632) 195 491 IPR006867 -
Gma01g01681 625 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 610 - -
Gma01g01681 625 MobiDBLite consensus disorder prediction 83 121 - -
Gma01g01681 625 Coils Coil 326 346 - -
Gma01g01681 625 Coils Coil 495 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01681 Gma-Chr1 52481429 52485109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01681 1 62 Acyl Lipid Metabolism Gene Families AT2G27090 37.097 1.23e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01681 - - gmx:102662030 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01681 01 52481429 52485109 Gma01g01681 01 52481429 52485109 ECH
Gma11g00714 11 6006832 6010626 Gma01g01681 01 52481429 52485109 ECH