Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01625 ATGGCTGGTCCCGGCAAATGCTTCCTCGTGACGGGTCCTCCGGGTGTGGGAAAAACCACTCTTATTATGAAAGTATTCGAGTCCCTCAAAGTCAATCCATCCCTCAAGCTTCAGGGCTTCTACACTCGGGAAATTAGGCGCGCCGGCCAGAGGGTTGGTTTTGAAGTGGTCACACTCGACGGTCGCACTGCCCCACTTGCTTCCATCGACATTTCAACCCCCGAGTCTCTCAGATGGCCTAATGTTGGCAAGTATAAAGTTGATGTTGCTTCCTTCGAGTCACTAGCACTTCCCGAGTTACAGGTTAAAGAAGACACTGATCTCTTCATCATTGACGAAGTTGGTAAGATGGAGTTGTTCAGTTCCTCATTCTTCCCTGCAGTTCTAAGAGTTTTGGAGTCAAATATCCCAGTTTTGGCTTCCATTCCAGTTCCAAAATTCGGCAGAGACATACCTGAAGGACTAAATCTGCCACAAGACCTGAGCTCAAAGATCTGTTGA 501 0.481 MAGPGKCFLVTGPPGVGKTTLIMKVFESLKVNPSLKLQGFYTREIRRAGQRVGFEVVTLDGRTAPLASIDISTPESLRWPNVGKYKVDVASFESLALPELQVKEDTDLFIIDEVGKMELFSSSFFPAVLRVLESNIPVLASIPVPKFGRDIPEGLNLPQDLSSKIC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01625 166 Pfam NTPase 8 146 IPR004948 GO:0017111
Gma01g01625 166 CDD AAA 3 133 - -
Gma01g01625 166 PANTHER CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE 5 153 IPR004948 GO:0017111
Gma01g01625 166 Gene3D - 6 160 IPR027417 -
Gma01g01625 166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 145 IPR027417 -
Gma01g01625 166 SMART AAA_5 4 157 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01625 Gma-Chr1 51952843 51955117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01625 K06928 - gmx:100527302 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01625 01 51952843 51955117 Gma01g01625 01 51952843 51955117 ECH