Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01593 ATGGAGGAGACTATTCTAGTGATTGATGTGGAGAAGATTAATTGTGAGGAAGGGGAATGCAAGAAGCTAAGAGAGGCATGTGAAAGATGGGGTTGTTTCAGGATCATTAACCACTCTATTCCTGCAACCCTCATGGCTGACATGAAAAAAGTCATTGAAGCTTTGCTTGATCTTCCTATGGAGATCAAGAAACGCAACACAGAATTCATTGCTGGCAGTGGTTACATGGCACCAAGCAAAGTCAACCCTTTCTATGAGGCCTTGGGCCTCTATGACTTGGCTTCCTCACAAGCTATGCACAATTTCTGCTCTCAACTTGATGCCTCACCTCACCAGAGGCAAATAATGGAGGCATATGGCCAAGCCATTCACGGTTTGGCGGTGAAAATAGGACAAAAGATGGCTGAATCTCTAGGCGTAGTAGTTGCTGATTTTGAGGACTGGCCATGCCAATTCAGAATTAACAAATATAACTTCACCCCAGAAGCGGTAGGGTCCTCTGGTGTTCAAATACACACAGATTCAGGCTTCCTAACCATTCTTCAAGATGATGAAAATGTTGGAGGTCTTCAAGTGATGAACAATTCTGGCTCTTTTGTGTCAATCCCTCCTTTCCCAGGGACCCTCCTTGTCAATCTTGGAGACATTGCTCGTGTGTGGAGCAATGGAAGGTTTTGCAATTTGACACACCGTGTACAATGCAAGGAAGCGACCAAACGGTTTTCAATTGCTACATTTATGATAGCACCCAGGAATAGGAATGTTGAAGCCCCAGCAGAATTGGTGGACCATGATCACCCCCGTTTGTATCAACCTTTTATTTATGAAGACTATAGGAAGCTCAGAATTAGCAACAAGATGCACAAGGGTGAAGCCCTGGAGTTATTACGCTTGGCCTAG 900 0.4456 MEETILVIDVEKINCEEGECKKLREACERWGCFRIINHSIPATLMADMKKVIEALLDLPMEIKKRNTEFIAGSGYMAPSKVNPFYEALGLYDLASSQAMHNFCSQLDASPHQRQIMEAYGQAIHGLAVKIGQKMAESLGVVVADFEDWPCQFRINKYNFTPEAVGSSGVQIHTDSGFLTILQDDENVGGLQVMNNSGSFVSIPPFPGTLLVNLGDIARVWSNGRFCNLTHRVQCKEATKRFSIATFMIAPRNRNVEAPAELVDHDHPRLYQPFIYEDYRKLRISNKMHKGEALELLRLA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01593 299 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 77 IPR026992 -
Gma01g01593 299 Pfam 2OG-Fe(II) oxygenase superfamily 151 246 IPR044861 -
Gma01g01593 299 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 297 - -
Gma01g01593 299 SUPERFAMILY Clavaminate synthase-like 7 295 - -
Gma01g01593 299 Gene3D - 3 296 IPR027443 -
Gma01g01593 299 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 148 250 IPR005123 -
Gma01g01593 299 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01593 Gma-Chr1 51540536 51543025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01593 5 278 Glycosyltransferase AT5G59530 25.773 4.44e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01593 K23947 - gmx:100783059 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01593 01 51540536 51543025 Gma01g01593 01 51540536 51543025 ECH
Gma01g01593 01 51540536 51543025 Gma11g00817 11 6860187 6861826 GST