Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01589 ATGGTCCCAAAACCAATCTTAGTCACAACACCACCGCCGGCAACTTCTGCACCCTCTCCACCGCTCAACGCAGTTTCACCCCTCAAAACAGAAGAAAAACCCCAAACACAAACCCTAAAAACCCCCACCACCACCACTCAAAAAGCTATAACCAAACCAAGCCCATCATCATCCACCACCAAAACGACGCCGCAGCAGCGCGTGGAGCTAAAGAGAAAAACAAACTCATGGGTCCCCGCACTAATGCTAAACGCATTCGACGACATCATCAACAACTTCATAGACCCTCCACTCAAACCCTCCATAGACCCTCGCCACGTGTTGTCACAAAACTTCGCCCCCGTCCACGAGCTTCCTCCGACGGAGTGTGAAGTCATTGAAGGCTCTCTCCCACCGTCCCTCGACGGCGCCTACATCCGAAACGGCCCCAACCCCCAGTTCCTCCCGCGTGGGCCCTACCACCTCTTCGACGGCGACGGCATGCTCCACGCGCTTCGCATCTCCCATGGCAAAAAACCCACGCTCTGCAGCCGCTACGTTAAAACCTACAAATACACCATGGAAAACGACGCCGGTTTCCCTCTCATCCCCAACGTGTTCTCCGGCTTCAACTCCCTCGTGGCCTCCGCGGCACGTGGCTCCCTCTCCGCGGCACGTGTCTTAACGGGGCAGTTTAACCCCGCTAACGGCATTGGCCTGGCCAACACCAGCTTAGCTTTCTTCGGGAATCGTCTCTTCGCGCTTGGCGAATCCGACCTCCCTTACGCCGTTAACGTAACCCCTGACGGCGACATCGAAACCCTCGGCCGTCACGACTTTGACGGAAAACTCACGTTTAGCATGACGGCGCACCCTAAGATAGACCCCGACACAGCGGAGTGCTTCGCCTTCCGTTACGGCCCCGTGCCACCGTTCCTCACCTACTTCCGTTTCGACGGTAACGGCAAAAAACACGAGGACGTTCCTATTTTCTCCATGCTAACACCTTCGTTCCTCCACGATTTCGCCATTACGAAGAAATACGCGATCTTCTGTGATATTCAGCTCGGAATGAACCCTCTTGACATGATCTCCGGTGGCTCCCCCGTCGGCTCCGTCGCCTCCAAGGTCCCAAGGATCGGAATCCTCCCTCGTGATGCTAAGGATGAGTCGATGATGAAGTGGTTTGAGGTGCCGGGGTTCAACATCATTCACGCGATAAACGCGTGGGAGGAGGACGAGGGAAGAACGGTGGTGCTGGTGGCGCCGAATATTCTTTCGATGGAGCACGCGCTGGAGAGAATGGAGCTAGTTCACGCGATGGTGGAGAAGGTTCGGATCGAGCTGGACACGGGGATAATCACGCGGCAACCGGTGTCGGCGCGGAATCTCGATTTCGCAGTTATAAACCCTGCGTTCGTGGGGAAGAAGAACAGGTTCGTTTACGCGGCGGTGGGGGACCCAATGCCGAAGATCTCGGGGGTGGTGAAACTCGACGTGTCGAAGGGGGAGGAGCGGAGGGACTGCACGGTGGGGTGCAGGATGTACGGCGAGGGTTGCTACGGCGGAGAACCGTTCTTCGTGGCGAGGGAAGAAGGGGGCGAGGAAGATGATGGGTACTTGGTGAGTTACGTGCACGATGAGAGGAAGGGGGAGTCGAGGTTTTTGGTGATGGACGCGAAGTCGCCGGAGCTAGATGTTGTGGCGGCGGTGAGGCTTCCGCGGCGGGTGCCGTACGGGTTCCATGGGCTGTTTGTGAAGGAGAGTGAGCTGAGGAAAGTGTCGTTGTCGTGA 1773 0.5702 MVPKPILVTTPPPATSAPSPPLNAVSPLKTEEKPQTQTLKTPTTTTQKAITKPSPSSSTTKTTPQQRVELKRKTNSWVPALMLNAFDDIINNFIDPPLKPSIDPRHVLSQNFAPVHELPPTECEVIEGSLPPSLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISHGKKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLVASAARGSLSAARVLTGQFNPANGIGLANTSLAFFGNRLFALGESDLPYAVNVTPDGDIETLGRHDFDGKLTFSMTAHPKIDPDTAECFAFRYGPVPPFLTYFRFDGNGKKHEDVPIFSMLTPSFLHDFAITKKYAIFCDIQLGMNPLDMISGGSPVGSVASKVPRIGILPRDAKDESMMKWFEVPGFNIIHAINAWEEDEGRTVVLVAPNILSMEHALERMELVHAMVEKVRIELDTGIITRQPVSARNLDFAVINPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKGEERRDCTVGCRMYGEGCYGGEPFFVAREEGGEEDDGYLVSYVHDERKGESRFLVMDAKSPELDVVAAVRLPRRVPYGFHGLFVKESELRKVSLS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01589 590 MobiDBLite consensus disorder prediction 29 71 - -
Gma01g01589 590 PANTHER BETA-CAROTENE DIOXYGENASE 46 586 IPR004294 GO:0016702
Gma01g01589 590 Pfam Retinal pigment epithelial membrane protein 113 580 IPR004294 GO:0016702
Gma01g01589 590 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 46 586 - -
Gma01g01589 590 MobiDBLite consensus disorder prediction 1 20 - -
Gma01g01589 590 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01589 Gma-Chr1 51488727 51491636 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01589 K09840 - gmx:100777875 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01589 01 51488727 51491636 Gma01g01589 01 51488727 51491636 ECH