Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01546 ATGGCCATAGCCATGCCTGAGGCTTCTTCTTCTTCTTCCACCACAACCAAACGCCAAAAACAAGAACAACATATTCATCAACAAGAAGAACAACCTTTGATCCCAGGTCTCCCTGACCACATAGCCCAATTATGTCTCTCATCCATCAACCCTTGTTTGTTATTCTCAATCTCCCACTCCTGGCGCCGTCTCATATACTCCCCTTCTTTCCCTCCCTTTTTTTCTCTCTACGCCATTCTCTCCCACTCCCACTCTTCCGCCGTCATCCAGTTCCACACCTTCGATCCCATCTCCGCCACGTGGCTCCCCCTCCCTCCCCACCCACCCCTCCACCACCTTCTCCTCCGCCGCCACCCCTCCTTCCTCTCCCGCAACCTCTCCGTCCAGTCCgTCTCCGCCGCTAACCGCCTCGTCCTCCTCGCCGCCACCACCCACAACCTCTCCCCGGCCCTCCCCCGCCCCTTGATCTTCCACCCCCTCACCAAAACCTGGTCCTTTGGCCCCACCCTCTCCACCCCGCGCCGCTGGTGCGCCCTCGGCTCCCTCGGCCCCACCGTCTACGTCGCCAGCGGCATCGGCTCCCACTTCTCCATCCACGTCGCGCGCTCCCTCCAAAAGTGGAACCTCCAAAACCCTAACGCCGTTTGGGAAAAGAAAACGGAGCTCAAGGACGGGAGGTTCAGCAGAGAAGCCATCGACGCCGTGGGGTGGAAGCAGAAACTCTGCATGGTCAACGTCAAGGGCGACGCCGCGAAAGAAGGGGTTGTGTATGACGTGGCGGAGGATGCTTGGAAGGAGATGCCGGAGGGGATGTTACACGGTTGGAGAGGACCCGTTGCGGCCATGGAAGAGGAAGTGATGTACGTTGTGGACGAAGCGAAAGGTGTTCTCAGAAGATACGTGGAAGAAGAAGACTCGTGGGAAGAGATTCTCGAGAACGAGAGACTCAAAGGAGCTGAAAAAATTGTTGCTTGGAGAGGGAAGTTGTGCGTCGTTTCGGCTTCTTCCGGGATCTCCGTCGTCGATGTTGCCGCGCCGTCGCCGCGGATTTGGCCGGTTCGGCTGCCGGAAGGGTTCGAGCCGGTGACTGTTCACATCTTGCCCCGGATACCGGCCGGTTTTTAG 1125 0.5831 MAIAMPEASSSSSTTTKRQKQEQHIHQQEEQPLIPGLPDHIAQLCLSSINPCLLFSISHSWRRLIYSPSFPPFFSLYAILSHSHSSAVIQFHTFDPISATWLPLPPHPPLHHLLLRRHPSFLSRNLSVQSVSAANRLVLLAATTHNLSPALPRPLIFHPLTKTWSFGPTLSTPRRWCALGSLGPTVYVASGIGSHFSIHVARSLQKWNLQNPNAVWEKKTELKDGRFSREAIDAVGWKQKLCMVNVKGDAAKEGVVYDVAEDAWKEMPEGMLHGWRGPVAAMEEEVMYVVDEAKGVLRRYVEEEDSWEEILENERLKGAEKIVAWRGKLCVVSASSGISVVDVAAPSPRIWPVRLPEGFEPVTVHILPRIPAGF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01546 374 SUPERFAMILY Kelch motif 76 333 IPR015915 GO:0005515
Gma01g01546 374 Gene3D - 74 331 IPR015915 GO:0005515
Gma01g01546 374 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP25 13 370 - -
Gma01g01546 374 MobiDBLite consensus disorder prediction 1 18 - -
Gma01g01546 374 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01546 Gma-Chr1 50968295 50969875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01546 - - gmx:100812086 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01546 01 50968295 50969875 Gma01g01546 01 50968295 50969875 ECH
Gma01g01546 01 50968295 50969875 Gma09g02000 09 45623388 45624892 GST