Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01488 ATGTGTTCTTTCTCTTCAGAACAGTCACCTTATCTTTTTCTTGGTTTTGCCCTTCACCCTCCATGGCCATCCAAGAGACAGCACCAGCACCTTCGGTTGAACATCCATAAAAGAAGGAGAGCACAATTGCAAGAAGCAAGACGGAGGAAGAGGATGATCATCTTGAAGCTTACAGAAATAAAGATGAGAAACTTGAAGTTGTACATGGAGAACCAAAGCATCATAGAGGAGAATCAGAAGTTGAGGAAGCAAGCAATGCTTCTTCACAAAGAGAATGATGTCCTCTTATTTCAGCTTCAAAAGAAGCTTTCCGAACAAAACAACAGCAAAACCAATTAA 339 0.4071 MCSFSSEQSPYLFLGFALHPPWPSKRQHQHLRLNIHKRRRAQLQEARRRKRMIILKLTEIKMRNLKLYMENQSIIEENQKLRKQAMLLHKENDVLLFQLQKKLSEQNNSKTN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01488 112 Coils Coil 71 91 - -
Gma01g01488 112 PANTHER PROTEIN LITTLE ZIPPER 1 1 111 - -
Gma01g01488 112 PANTHER PROTEIN LITTLE ZIPPER 4 1 111 IPR039312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01488 Gma-Chr1 50129160 50130463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01488 - - gmx:100800538 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02054 18 53888614 53889696 Gma01g01488 01 50129160 50130463 PCT
Gma09g02452 09 49891149 49891886 Gma01g01488 01 50129160 50130463 PCT
Gma01g01488 01 50129160 50130463 Gma18g02054 18 53888614 53889696 PCT
Gma01g01488 01 50129160 50130463 Gma09g02452 09 49891149 49891886 PCT