Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01482 ATGGCTTCTTCGGAAGCCGATTCCCGGCTGAGACAGGTCGTGGTCCCCGCGCTCGAGAAGATCGTCAAGAACGCGTCGTGGCGGAAGCACGCGAAGCTCGCGCACGAGTGCAAATCGGTGATCGAGAGCCTCAACCACCAGCAAGCGCCGCCGCCGGGATCTCCGTCGGACAACGAACCGGAAACCGCCGCCCCCGGTCCGCTCCACGACGGCGGCCCGGTGGAATTCTCGCTCGCGGAGTCGGAGTCCATCCTCGCGCCGCTCATCAATGCCGCCGGCTCCGGCGTTCTCAAGATCGCCGATCCCGCCGTCGACGCCATCCAGAAGCTCATCGCGCACGGCTACCTCCGCGGTGAGGCTGACCCGGACTCCGGCGCCGCCGCGCCGGAGGCCAAGCTACTCTCCAGCCTAATCGAATCGGTTTGCAAATGCCACGATTTCGGCGACGATGCGATGGAATTGCTCGTCTTGAAAACCTTACTCTCCGCTGTGACGTCGATTTCGCTGCGAATCCACGGCGATTCATTGCTCCTCATAGTGCGAACCTGCTACGACATATATTTGGTCAGCAAAAACGTTGTGAATCAAACAACGGCGAAGGCTTCGTTGATTCAAATGCTGGTGATCGTGTTCCGGAGAATGGAGGCGGATTCCTCCACGGTGCCTATTCAGCCGATTGTGGTGGCGGAATTGATGGAGCCGGTGGAGAAATCCGACGTGGACAATTCGATGACGCAGTTCGTTCAAGGTTTCATAACGAAGATAATGCAGGACATTGACGGAGTTTTGAACCCTACGACGCCGAGTGGGAAGGTTTCTTTATTAGGTGGACACGACGGTGCGTTTGAGACAACCACGGTTGAGACTACGAACCCTACCGATTTGTTGGATTCTACTGATAAGGACATGTTGGATGAGAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTGGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGGGACGATGATTTGGAGGTTCAGATTGGGAACAAGTTGAGGAGGGATGCTTTCTTGGTGTTTAGGGCGCTTTGTAAGTTGTCCATGAAGACACCGCCCAAGGATGCGGCCGGGGACCCGCAGCTGATGAAGGGGAAGATTGTGGCTCTGGAGTTGCTGAAGATCTTGCTGGAGAATGCTGGAGCTGTGTTCAAGACTAGTGAAAGCAGGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCCTTGTTGAAGAACAGCGCTTCAACTCTTTTGATTGTGTTTCAGCTGTCATGCTCCATTTTTATCAGTCTGGTGTCAAGATTTAGAGCTGGATTGAAGGCAGAAATTGGGGTTTTTTTCCCTATGATTGTTCTGAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGACAGTGCTTCGATTTCTGGATAAGCTTTGTGTTGATTCACAGATATTGGTTGACATATTTATCAACTATGACTGTGATGTCAATTCATCAAATATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAATGACCACACTTTTGCCACCTCAAGAAGCAACATTAAAACTTGAGGCCATGAAAAGCTTGGTTGCCGTTCTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGCATTCCTGACCCTCATTCAGCCAAGAAAGTTGAAGCAACAGATAATAGCCCTGAAAGTGGAGGTTTTACCATGGTAAATGGGAATGGGGAAGACCCTGTTGATGGTTCTGACTCCCAATCGGAAGTCTCCAATGATGCATCTGATGTTTCAACTATTGAGCAGCGACGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTTCTGATCAATGCCAAGAAGGTGGGTGATTCGCCAGAGGAAATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGGGAAGAGTTATCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTCAGACTGCCTGGTGAGGCGCAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGACACTGCATATGTCCTAGCCTATTCTGTTATAATGCTTAATACAGATGCTCACAATCCTATGGTGAAGAATAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATTTGCCTGAGGAATACTTGAGGGCCTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGTGGCTCCTCAACAAAAACAGGCTGTGAACCCTAATAGACTTTCAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAACGCGGGGAAGGGAACATGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAATCTGAGTCAATCTATTATGCAGCAACAGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGTTGGGCACCGATGTTAGTCGCTTTCAGTGTTCCTCTTGATCGAAGTGATGATGAGGTTGTAATATCTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCGATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAAAATGTCGATGCAATTAAGGCAATAGTTGTTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAACATATCTTGACTTGTGTTTCCCGGTTTGAGCATCTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCCTTTCCTCAGAATGATTCAGAAAAAACAAAGCCGGCAAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACCTGGGAGGATGCAGTATGCAGCTGCTACTTTGATGCGGGGTTCATATGATAGTGCTGGAATTGGCAGTAATGGTTCTGGTGTCACATCAGAACAGGTGAACAATCTAGTCTCTAATTTAAATATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGCCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGGTCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGCTGTTCGGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAACTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTTATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTAATTATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAATCTGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTATCTTTTGAAATTATGGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCACAGACTGTGTGAATTGCCTAATTGCGTTCACCAATAGTAGATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTCTGTGCAACAAAACTAGCAGCAGGAGACCTTGGCTCATCATCAAGGAATAAGGATAAGGAAGTTACTGGAAAGATTTCTTCATCTTCACCTCAAACAGGAAAGGAGGGGAAAAAAGATAACGGAGAGGTGATTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTGGAAGTCCTGTTTGAAACCTTACGTAACCATGGGCATCTTTTTTCACTACCTTTATGGGAAAGAGTATTTGAGTCTATCCTATTTCCTATATTCGATTATGTTCGGCATTCTATTGATCCTTCAGGGAGTAGTTCACCGATCAATGAAGTAGAGGCTGATGGTGAGCTTGATCAAGATGCTTGGCTTTACGAAACATGCACATTGGCTCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTATGACACTGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTGGTTAGCTTTATAAAGCGCCCTCATCAAAGCCTTGCTGGCATTGGTATTGCTGCTTTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGAAGTAGCAAATGCAACACTTCCTAACTTTCTGTTTGTTGAAAGTGAGGACTTTACTAAAAATCAGGAACATGCTTCAACAGCTGAAGATGATAGAGATCGTGCCGAGTCTGGCTCCCCAGATAATTTAGAAAGCTTGAGGATTCGTCGTCTTTATGCTCATTTAGCTGACGCAAAATGCCGAGCTGCTGTTCAACTTTTATTGATTCAGGCGGTGATGGAGATCTATAACATGTATCGCCCTCACCTTTCAGCAAAAGCCATGCTAGTCCTGTTTGATGCTCTGCACGATGTTGCGATACATGCACACCAGATTAACGGCAATACTATGTTACGTTCAAAGCTTCAAGAGTTTGGTTCTGTGACCCAAATGCAAGACCCTCCACTGTTACGCCTCGAGAATGAATCGTACCAGACCTGCCTTACATTTTTACAAAACCTTGTCATTGACAAGCCTCCTAGTTACAAGGTGGATGAGGTTGAATCACATCTCATCCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGAACAAAAATCTGAATCTTCTCATGGTAGACAGCAACACTGGTTGATTCCCTTAGGCACTGGGAAGAGGAGAGAATTGGCTGCACGTTCACCTCTCATTGTGGCTACTCTGCAGGCTATTTGTAGTTTGGGAGATACTTCTTTTGAGAAGAACTTGTCTCATTTCTTCCCTCTCATTTCTAGCTTGGTACGTTGTGAACATGGGTCAAAGGATGTCCAGGTTGCTCTCAGTGACATGCTTAGTTTATCAGTTGGTCCTATTTTGTTACAGTCATGTTGA 5352 0.4421 MASSEADSRLRQVVVPALEKIVKNASWRKHAKLAHECKSVIESLNHQQAPPPGSPSDNEPETAAPGPLHDGGPVEFSLAESESILAPLINAAGSGVLKIADPAVDAIQKLIAHGYLRGEADPDSGAAAPEAKLLSSLIESVCKCHDFGDDAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDVDNSMTQFVQGFITKIMQDIDGVLNPTTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDEKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKDAAGDPQLMKGKIVALELLKILLENAGAVFKTSESRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMTVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVMTTLLPPQEATLKLEAMKSLVAVLKSMGDWMNKQLRIPDPHSAKKVEATDNSPESGGFTMVNGNGEDPVDGSDSQSEVSNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGDSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRALFERISRNEIKMKENDVAPQQKQAVNPNRLSGLDSILNIVIRKRGEGNMETSDDLIRHMQEQFKEKARKSESIYYAATDVVILRFMIEVCWAPMLVAFSVPLDRSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKPAKSTILPVLKKKGPGRMQYAAATLMRGSYDSAGIGSNGSGVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLSFEIMEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLGSSSRNKDKEVTGKISSSSPQTGKEGKKDNGEVIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEVLFETLRNHGHLFSLPLWERVFESILFPIFDYVRHSIDPSGSSSPINEVEADGELDQDAWLYETCTLALQLVVDLFVNFYDTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEVANATLPNFLFVESEDFTKNQEHASTAEDDRDRAESGSPDNLESLRIRRLYAHLADAKCRAAVQLLLIQAVMEIYNMYRPHLSAKAMLVLFDALHDVAIHAHQINGNTMLRSKLQEFGSVTQMQDPPLLRLENESYQTCLTFLQNLVIDKPPSYKVDEVESHLIRLCQEVLEFYIEVAGFEQKSESSHGRQQHWLIPLGTGKRRELAARSPLIVATLQAICSLGDTSFEKNLSHFFPLISSLVRCEHGSKDVQVALSDMLSLSVGPILLQSC 1783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01482 1783 SUPERFAMILY Sec7 domain 615 806 IPR035999 GO:0005085|GO:0032012
Gma01g01482 1783 MobiDBLite consensus disorder prediction 1306 1336 - -
Gma01g01482 1783 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 8 1776 - -
Gma01g01482 1783 Pfam Sec7 domain 619 800 IPR000904 GO:0005085|GO:0032012
Gma01g01482 1783 Gene3D - 611 692 - -
Gma01g01482 1783 SMART sec7_5 615 800 IPR000904 GO:0005085|GO:0032012
Gma01g01482 1783 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 217 IPR032629 -
Gma01g01482 1783 MobiDBLite consensus disorder prediction 1532 1551 - -
Gma01g01482 1783 Pfam BIG2 C-terminal domain 1574 1772 IPR046455 -
Gma01g01482 1783 Pfam C-terminal region of Mon2 protein 1348 1426 IPR032817 -
Gma01g01482 1783 CDD Sec7 618 800 IPR000904 GO:0005085|GO:0032012
Gma01g01482 1783 MobiDBLite consensus disorder prediction 592 610 - -
Gma01g01482 1783 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 346 505 IPR032691 -
Gma01g01482 1783 Pfam Domain of unknown function (DUF1981) 1167 1249 IPR015403 -
Gma01g01482 1783 Gene3D - 693 812 IPR023394 -
Gma01g01482 1783 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 8 1776 - -
Gma01g01482 1783 MobiDBLite consensus disorder prediction 41 72 - -
Gma01g01482 1783 MobiDBLite consensus disorder prediction 1532 1550 - -
Gma01g01482 1783 SUPERFAMILY ARM repeat 1133 1770 IPR016024 -
Gma01g01482 1783 MobiDBLite consensus disorder prediction 559 610 - -
Gma01g01482 1783 ProSiteProfiles SEC7 domain profile. 611 798 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01482 Gma-Chr1 50010404 50020955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01482 K18442 - gmx:100798955 3479.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02051 18 53860043 53862165 Gma01g01482 01 50010404 50020955 PCT
Gma09g02455 09 49916147 49927340 Gma01g01482 01 50010404 50020955 PCT
Gma01g01482 01 50010404 50020955 Gma18g02051 18 53860043 53862165 PCT
Gma01g01482 01 50010404 50020955 Gma09g02455 09 49916147 49927340 PCT