Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01435 ATGTCTTGTTCCTACAAGGTGTTATTGCTAACACTATGGCCTGATTCCTTGTCAACAAATGAGGAACAAGAGGCTTTGCTTCAAAGCAAACGGGGAGTAGGCCCAACTATCTCAGAATATTGTAAATGGAATGGTGAGTTGCCTAGTTCTCTTTCTAGTCTCACTCAACTTGAGACACTTAATATTTCCAACAACTTTCTTCTTACTGGTGTGATCCCTCCTACTTTGGATCATTTGAAGAATTTAACCCTACTTTCCCTTGACTCAAACCAAATTCAAGGCCACATTCCAGAACAACTAGGGAATTTAAGAGGGTTGGAGCAGTTAACTCTTTCAAATAACTCACTCAGTGGTTCAATCCTTTCTACTTTAAATCACTTGATCCATCTCAAAGTTTTGGATCTTTCTTATAATAAGATTTTTGGTGTTATACCAGAGGGGATATTTGCACTGACAGAACTAACAAATGTTCAACTATCTTGGAATCAAATATCTGGTTCAATTCCATCTAGGATTGGACAAATCCCAAGACTTGGAATTTTAGATATTTCCAACAATCAGCTTGAGGGACCTATTCCATATGGTGTTATGAACCATTGTAGTTATGTGCAGCTAAGAAACAACTCTTTAAATGGAAGCATTCCTCCTCAAATAGGCAATATTTCATATCTAGATCTTAGTTATAATGATCTCACAAGAAATATACCTACGGGACTCTATTATGTGCCTTACCTTAATTTGTCTTACAATTCCTTCAATGAGTCAGATAATAGTTTTTGTGATGTTCCAAAAGACTCATTAATTGGCAATAAGGATTTCCAATATTCACGCTCTTCTTAG 840 0.3631 MSCSYKVLLLTLWPDSLSTNEEQEALLQSKRGVGPTISEYCKWNGELPSSLSSLTQLETLNISNNFLLTGVIPPTLDHLKNLTLLSLDSNQIQGHIPEQLGNLRGLEQLTLSNNSLSGSILSTLNHLIHLKVLDLSYNKIFGVIPEGIFALTELTNVQLSWNQISGSIPSRIGQIPRLGILDISNNQLEGPIPYGVMNHCSYVQLRNNSLNGSIPPQIGNISYLDLSYNDLTRNIPTGLYYVPYLNLSYNSFNESDNSFCDVPKDSLIGNKDFQYSRSS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01435 279 PRINTS Leucine-rich repeat signature 106 119 - -
Gma01g01435 279 PRINTS Leucine-rich repeat signature 127 140 - -
Gma01g01435 279 PANTHER RECEPTOR-LIKE PROTEIN 14 43 124 - -
Gma01g01435 279 PANTHER RECEPTOR-LIKE PROTEIN 14 129 253 - -
Gma01g01435 279 PANTHER RECEPTOR-LIKE PROTEIN 14 103 194 - -
Gma01g01435 279 PANTHER RECEPTOR-LIKE PROTEIN 14 78 174 - -
Gma01g01435 279 Pfam Leucine rich repeat 49 92 IPR001611 GO:0005515
Gma01g01435 279 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Gma01g01435 279 Gene3D Ribonuclease Inhibitor 37 276 IPR032675 -
Gma01g01435 279 SUPERFAMILY L domain-like 39 255 - -
Gma01g01435 279 SMART LRR_typ_2 127 151 IPR003591 -
Gma01g01435 279 SMART LRR_typ_2 79 103 IPR003591 -
Gma01g01435 279 SMART LRR_typ_2 54 78 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01435 Gma-Chr1 49167870 49168946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01435 49 268 Receptor kinase-like Gene Family AT3G11080 37.333 1.57e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01435 - - vun:114165534 335.495