Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01429 ATGTTTGTCAATAAAGTCAGATTCAGATACCCTTTAAAAATCCCATTTTTAAGTGTCCTTTGTTGTTTACATGCTCGTTCCTTGCCTCCTTATGTGAAAGCCATCAATTGGAACACCTCCCACAACTTTGTTCAAAACAACCCCCTCCTTTCTCTCTTGGAAAGGTGCAAGTCATTGGACCAGTTAAAGCAAATCCAGGCTCAGACGGTCTTGACTGGCTTGGTTAACGATGGCTTTGCCATGAGTTGTCTTGTTGCATTCTGTGCTTTATTGGAGTCGGGATACGTGGAAAGCGAGGACTTGGAAGGAGCTGGTCTGTTGTACAAGAGGATGTTGCGATGTGGTGTTTTGAAGCCGGATAATCTCACTTACCCTTTGTTGATCAAGGATTGTTCTTGTCCATCTATGAATTGTGTTGGTTTTACAGTACTTGGGCATGTGTTGAGGTTGGGTTTTGAATTTGATATATTTGTGCACAATGCGTCAATCACTATGCTACTTTTGTATGTAGAATTGGAGGCAGCATACGATGTGTTCAATAAAGGTTGTGTGAGAGACTTGGTAACATGGAATGCGATGATTACTGGGTGTGTTAGAAGAGGACTAGCTAATGAGGCTAAAAAACTCTACCGGGAAATGGAGGCAGAGAAAGTGAAACCAAATGAGATTACAATGATTGGGATTGTCTCTGCTTGTTCTCAATTGCAGGATTTGAATCTTGGCAGGGAGTTTCATGATTATCTCAAAGAACATGGCCTTGAGTTGACAATCCCACTCAATAATTCACTTATAGACATGCATTTGAAGTGTGGAGACCTGTTGGCTGCATGGGTTCTATTTGCTAACACAGCATATCAGACCCTTGTTTCATGGGCTACAATGGTTTTGGGATATGCCAGATTCTGTTTCTGGGTGTTGCTCCCGAGCTTTTGCATACTATTCCAGAGAAGAGTGTTGTGCCTTGGAATGCAATCATTAGTGGCTGTGTCCAAGCTAAGAATGGTAAAGACACATTCGATCTATTCAATGAAATGCAGATTAGGAAAATAG 1050 0.4162 MFVNKVRFRYPLKIPFLSVLCCLHARSLPPYVKAINWNTSHNFVQNNPLLSLLERCKSLDQLKQIQAQTVLTGLVNDGFAMSCLVAFCALLESGYVESEDLEGAGLLYKRMLRCGVLKPDNLTYPLLIKDCSCPSMNCVGFTVLGHVLRLGFEFDIFVHNASITMLLLYVELEAAYDVFNKGCVRDLVTWNAMITGCVRRGLANEAKKLYREMEAEKVKPNEITMIGIVSACSQLQDLNLGREFHDYLKEHGLELTIPLNNSLIDMHLKCGDLLAAWVLFANTAYQTLVSWATMVLGYARFCFWVLLPSFCILFQRRVLCLGMQSLVAVSKLRMVKTHSIYSMKCRLGK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01429 349 PANTHER OS10G0400250 PROTEIN 94 303 - -
Gma01g01429 349 Pfam PPR repeat family 186 232 IPR002885 -
Gma01g01429 349 Gene3D Tetratricopeptide repeat domain 91 256 IPR011990 GO:0005515
Gma01g01429 349 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 220 IPR002885 -
Gma01g01429 349 TIGRFAM PPR: pentatricopeptide repeat domain 188 222 IPR002885 -
Gma01g01429 349 Coils Coil 199 219 - -
Gma01g01429 349 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 34 90 - -
Gma01g01429 349 Pfam PPR repeat 93 116 IPR002885 -
Gma01g01429 349 PANTHER OS10G0400250 PROTEIN 34 90 - -
Gma01g01429 349 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 94 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01429 Gma-Chr1 49044680 49045807 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01429 49 318 Glycoside Hydrolase AT3G49170 24.333 2.94e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01429 - - gmx:102660845 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00747 07 7898329 7901966 Gma01g01429 01 49044680 49045807 GST