Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01403 ATGTTCATAACCCTTCAATTAGTCTCAACTAATAGAATCATTTTAGCTTTGAAACTCTCATATCTTGTATTTCTCTTTTCTTCAATTCCAAAAGCCAAAGGCTACACTACTAGAGCTCATATCTTCATCTATGCTGGCTGCTCTCAAGAAAAATACCAACCAAACACACCCTTTGAAGCCAACCTTAATTCCTTTCTGTCTTCAGTTTCTGGCTCTTCTTCTGACACTTCTTACAATAGCTTTGCCATTGGAAATGGAAGCTCATCACCACCAGAAGGGTCCATATATGGTTTATACCAATGCAGGGCTGATTTGAGGCCAAATGAGTGCTCAAAATGTGTTAAAAGTTGTGTTGACCAAATAGGCTTGATTTGTCCCTTGGCTTTTGGAGCATCTTTGCAACTTGAAGGCTGTTACATAAGATATGAGCATGTTGATTTCCTTGGCAAGCCTGACACAAGTCTTTGGTACAAGAGGTGCAGTAAAGCAGTGGCAAATGATGCCGAGTTCTTCCGGCGAAGAGATGATGTTCTTGCTGATTTGCAAGTAGCTAATGGATTTGGAGTCAGCACTTCAGGTTTTGTTGAAGGGTTTGCACTGTGTTTGGGGGACTTGTCTATGGCTGATTGCTCCTCTTGCCTTCAAGAAGCCGTGGGAAAGCTTAGGAGTATATGTGGATCAGCAGCTTCAGCTGATGTGTTCTTGGCACAGTGTTATGCTCGGTATTGGGAAGCTGGCTACTATGATGAAGCAGAATCTTCCAAAGACGATGATCAAGTGGGGAAATCAGTTGCCATTATTGTGGGAATACTAGCAGGTCTAGCCATTCTTGTTGTTATTCTCTCAATCTGCAAAAGAGCAATGGGTAACCATTTAATTTCTTAA 885 0.4158 MFITLQLVSTNRIILALKLSYLVFLFSSIPKAKGYTTRAHIFIYAGCSQEKYQPNTPFEANLNSFLSSVSGSSSDTSYNSFAIGNGSSSPPEGSIYGLYQCRADLRPNECSKCVKSCVDQIGLICPLAFGASLQLEGCYIRYEHVDFLGKPDTSLWYKRCSKAVANDAEFFRRRDDVLADLQVANGFGVSTSGFVEGFALCLGDLSMADCSSCLQEAVGKLRSICGSAASADVFLAQCYARYWEAGYYDEAESSKDDDQVGKSVAIIVGILAGLAILVVILSICKRAMGNHLIS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01403 294 Pfam Salt stress response/antifungal 164 242 IPR002902 -
Gma01g01403 294 Pfam Salt stress response/antifungal 47 144 IPR002902 -
Gma01g01403 294 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 14 288 - -
Gma01g01403 294 PANTHER PLASMODESMATA-LOCATED PROTEIN 8 14 288 - -
Gma01g01403 294 Gene3D - 153 245 IPR038408 -
Gma01g01403 294 Gene3D - 39 147 IPR038408 -
Gma01g01403 294 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Gma01g01403 294 ProSiteProfiles Gnk2-homologous domain profile. 149 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01403 Gma-Chr1 48617972 48620117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01403 13 282 Receptor kinase-like Gene Family AT5G40380 26.374 2.67e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01403 - - gmx:100809227 544.273