Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01385 ATGAAGAGCCACATTGTACTCCTGTCTCCTGGAGAACATGGTAATGACAATCAATCCGATACCTTCCAGTTAGAAGATTTGGCTTTGTCAAAAAGATCCCAAATGAAATTCGATGCCTTGAAATCGAAATCAGTTAGACTGGACATCAACTTTAAGTCCCCATCACATACTGGACTCCAGACTACAGAAATGGTTAAGGGGTTGACAGAGCAATTTCCAGCTGCTACACCTCTTGCTTTGGTACTAAAACAGTTTTTGGCTGATCGAAGCCTTGATCAGTCCGACTCTGGTGGCTTAAGTTCCTACTGTTTGGTCTTACTAATTATACGATTTCTTCAGCATGAACACCATCTTGGCTGGCCAATCAACCAAAATTATGGAAGTCTTCTAATGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGCCAAATGAGAATATCAGTTCAGGGAAGTGGACTTTATATAAAAAGAGAAAGAGGTTGTAGCATCGATCCAATTCACATAGATGATCCTCTTTTTCCAACTAATAATTTGGGAAGGAATTGCTTCTGA 558 0.3961 MKSHIVLLSPGEHGNDNQSDTFQLEDLALSKRSQMKFDALKSKSVRLDINFKSPSHTGLQTTEMVKGLTEQFPAATPLALVLKQFLADRSLDQSDSGGLSSYCLVLLIIRFLQHEHHLGWPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNLGRNCF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01385 185 Pfam Cid1 family poly A polymerase 125 177 IPR002058 -
Gma01g01385 185 Gene3D - 29 185 - -
Gma01g01385 185 PANTHER POLY(A) RNA POLYMERASE 30 185 IPR045862 GO:0004652|GO:0031499|GO:0043631
Gma01g01385 185 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 30 185 - -
Gma01g01385 185 SUPERFAMILY PAP/OAS1 substrate-binding domain 73 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01385 Gma-Chr1 47927687 47930097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01385 - - gmx:121172611 369.777