Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01375 ATGGAGCAACCCATGTGTGAAAATAGTGATATTCAAAATGATAAAAAAACAAACAAACTTCCCTCTCTCACTCACTCACTCGGCAACGACGACGGTCTTGGAGTTCCCGTAGCTCATCAACGACAGTCACATGTGGCAGATGACAGGGTTCCCGTCGCGCCGAGGCAGAGCAGCTACAATCAACACCGCGCCACCACTGCACACCTCGGAGCGCCACCACAAATCCCTCATAACTTCGAAAAAACCTGTTGCATAGGTTTGGCTAACCTCCTCACATTGATGAGGTGTTCAAAGAGACACATATTAGAAAAAAGGACAACACCTAAGTGGATAAGAGATCAGAACAAACCTATGGAGACTTTCAAAAGAAATTGCAGGAAGGCTCCAGTGATGGGACACATGCCATTAACCCTGCATCAAGAGTTAAATTGTGGGCTGATGATGTTGGAGGCAAGTCTCAAGGACGTCTTTATGGAGCTGGAGACATGTCCTCCCATTATAGGTCTGTGGGCTTTAAACATTCTTGTAGTGGTTGTCGATGGAGTTGTGTGCAATGGTGGAGGTGCAATTGGTGTTTGCAGAGAAGAGAAGGAACATCGTGTTGTGGAGGACTATGTAGCCATATGGTTGAGTGAAACGACTTCCCAACCCTGCGTTCAATCCGGTAGAACACGAACGATGGATTATTCAGGCTACAACTTCCAGCAGCAACCACAGCAACATTCCTATGGTTACGACCCTTCTCAGATCCCAATCCAACCCTACGATCAATCCTATGCTGCGTACCAACAATACTACGCTTACAATCCCCAATACGCGTATTTCCCCAACGCACACCAAACCCAGTTTCAGTTCCAACCCGAACCTGCTCCGCTTCACCCTCCCGGCGTCAACCCCTCCGCTGCCGAACCCGCCCCGACTGGGCCATCTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGACCATTTAGAGGGGCCGGTCGTGGTCGAGGCCATGGTAGGGGACATGGAGTGGGGGGTGTTAGACACATTCCATTTCATTCTTCTGGACCTGTTGTTTCTAATGTGCCAGCTCGAGTGCAACCACCAGTACCACCACGTAAAGTGTGTTGTGAAATTTGTAAGGTTGAGTGCAATTCTCCAGAAATCTTGGAGCAACACAAGGTTGGGAAGAAACATCAGAAGAATATGAGGGTGCATGAAGAATTGCAGAGGCGCAACGCTATAAATGAACAACAGAGTGGGGAAATTCCTACCTCTCAATTGAATTTAACAGACCAACCTAAGGAAGTTCAGGAGTCCGAGAAAAATGGACACCCCACAGAAAATATGGGCTCTGGGGTTATAATCAATAATCATGAGGAGGAAATACAGCTGCAGAATAACGTAGGAAACATGTCCGAGGTTCCAGCTGAGGTGCCCGAGGGGAAAACCGTGGATAACTCTGCTGCAAGAGGCCGAGGATTGAAGCGGAAGAAGAAAGGAGGAAAAGGAGGTAAATACATGAGAACTAATGATGGTTCAAAGCCAGTGGAGCCTGCACAAACTATGTCTTTTAGATGTGAGCTGTGTGATGTTAAATGTGAGTCACAAGTTGTTTACCAGAGTCATATGACTGGGAAAAAACACTTATCAAAACTAAGGCGTGCTTCATCTGGAGTAGGCCAGCAGCAAGCCCTGTCTGGAGCACTCTCAGGGCTTCAAGCAGTTTACCCACCTGACATCAACGCTCTGTCTAATGCAATTAATGCTCAAGTTCAACAAGGTGATAATGATCCACAGGTACTTTTGGCTCAGCTCCTGATGACCGTACTATCTCAAGCACAAGTTCCAGCAACAGCACCAGTGACAGGTGCCATAGCTTCTCAGATACCAGCACCAACATCTATGGCTGGACCAAGTTATGAACCCCAGTTGTTGCAGACAAATTCTTCTGGGGAAACAAAAACTGAGCTGCCAGGTTCAAGTGTCAGCACCCAAATTGAAGGTGGAGGTTCTGAAACCAAACAACAGGTGTGA 2019 0.476 MEQPMCENSDIQNDKKTNKLPSLTHSLGNDDGLGVPVAHQRQSHVADDRVPVAPRQSSYNQHRATTAHLGAPPQIPHNFEKTCCIGLANLLTLMRCSKRHILEKRTTPKWIRDQNKPMETFKRNCRKAPVMGHMPLTLHQELNCGLMMLEASLKDVFMELETCPPIIGLWALNILVVVVDGVVCNGGGAIGVCREEKEHRVVEDYVAIWLSETTSQPCVQSGRTRTMDYSGYNFQQQPQQHSYGYDPSQIPIQPYDQSYAAYQQYYAYNPQYAYFPNAHQTQFQFQPEPAPLHPPGVNPSAAEPAPTGPSQYRGRGGRGGRPFRGAGRGRGHGRGHGVGGVRHIPFHSSGPVVSNVPARVQPPVPPRKVCCEICKVECNSPEILEQHKVGKKHQKNMRVHEELQRRNAINEQQSGEIPTSQLNLTDQPKEVQESEKNGHPTENMGSGVIINNHEEEIQLQNNVGNMSEVPAEVPEGKTVDNSAARGRGLKRKKKGGKGGKYMRTNDGSKPVEPAQTMSFRCELCDVKCESQVVYQSHMTGKKHLSKLRRASSGVGQQQALSGALSGLQAVYPPDINALSNAINAQVQQGDNDPQVLLAQLLMTVLSQAQVPATAPVTGAIASQIPAPTSMAGPSYEPQLLQTNSSGETKTELPGSSVSTQIEGGGSETKQQV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01375 672 SMART c2h2final6 519 543 IPR013087 -
Gma01g01375 672 SMART c2h2final6 369 393 IPR013087 -
Gma01g01375 672 MobiDBLite consensus disorder prediction 1 25 - -
Gma01g01375 672 MobiDBLite consensus disorder prediction 408 443 - -
Gma01g01375 672 Pfam Zinc-finger of C2H2 type 519 543 - -
Gma01g01375 672 Pfam Zinc-finger of C2H2 type 371 393 - -
Gma01g01375 672 MobiDBLite consensus disorder prediction 408 428 - -
Gma01g01375 672 MobiDBLite consensus disorder prediction 288 302 - -
Gma01g01375 672 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 227 299 - -
Gma01g01375 672 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 302 648 - -
Gma01g01375 672 SMART ZnF_U1_5 366 400 IPR003604 GO:0003676|GO:0008270
Gma01g01375 672 SMART ZnF_U1_5 516 550 IPR003604 GO:0003676|GO:0008270
Gma01g01375 672 SUPERFAMILY beta-beta-alpha zinc fingers 510 550 IPR036236 -
Gma01g01375 672 SUPERFAMILY beta-beta-alpha zinc fingers 363 401 IPR036236 -
Gma01g01375 672 MobiDBLite consensus disorder prediction 285 359 - -
Gma01g01375 672 MobiDBLite consensus disorder prediction 486 511 - -
Gma01g01375 672 MobiDBLite consensus disorder prediction 631 672 - -
Gma01g01375 672 Gene3D Classic Zinc Finger 500 550 - -
Gma01g01375 672 Gene3D Classic Zinc Finger 356 402 - -
Gma01g01375 672 PANTHER OS06G0651300 PROTEIN-RELATED 227 299 - -
Gma01g01375 672 PANTHER OS06G0651300 PROTEIN-RELATED 302 648 - -
Gma01g01375 672 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01375 Gma-Chr1 47738496 47754712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01375 - - gmx:100794880 796.578