Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01360 ATGTCCCTTGTGTGCCTGGCTCTCGGTCCAATGGCACAAGGGGAAATGACATGTGGCCAGGTTGTGAGCAACCTGACCCCATGCATCTCCTATGTGGTGTATGGTGGAACCAATGTTCCTGAACAGTGCTGCAATGGGATAAGAAATCTCTATGGCATGGCTCAGACCAAACCAGACCGCCAAGCTGTTTGCAACTGCATCAAGAACGGTGTTAGGAACAGTGGCTTCAACTACTCTGACTTCAACCTCAACCTTGCTGCTAACCTTCCCAAGAAATGTGGGGTCAACATTCCCTACCAGATCAGCCCCAACACAGACTGCACTAGGGTGCAGTGA 336 0.5089 MSLVCLALGPMAQGEMTCGQVVSNLTPCISYVVYGGTNVPEQCCNGIRNLYGMAQTKPDRQAVCNCIKNGVRNSGFNYSDFNLNLAANLPKKCGVNIPYQISPNTDCTRVQ 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01360 111 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 4 109 - -
Gma01g01360 111 PRINTS Plant phospholipid transfer protein signature 17 33 IPR000528 GO:0006869|GO:0008289
Gma01g01360 111 PRINTS Plant phospholipid transfer protein signature 98 109 IPR000528 GO:0006869|GO:0008289
Gma01g01360 111 PRINTS Plant phospholipid transfer protein signature 38 52 IPR000528 GO:0006869|GO:0008289
Gma01g01360 111 PRINTS Plant phospholipid transfer protein signature 80 97 IPR000528 GO:0006869|GO:0008289
Gma01g01360 111 CDD nsLTP1 17 108 - -
Gma01g01360 111 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 16 110 IPR036312 -
Gma01g01360 111 ProSitePatterns Plant lipid transfer proteins signature. 89 110 IPR000528 GO:0006869|GO:0008289
Gma01g01360 111 Pfam Protease inhibitor/seed storage/LTP family 18 107 IPR016140 -
Gma01g01360 111 PANTHER - 4 109 IPR000528 GO:0006869|GO:0008289
Gma01g01360 111 SMART aai_6 18 107 IPR016140 -
Gma01g01360 111 Gene3D - 15 111 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01360 Gma-Chr1 47363609 47364784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01360 1 111 Acyl Lipid Metabolism Gene Families AT2G38540 46.610 9.06e-29 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01360 - - gmx:100499726 238.81