Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01356 ATGGGGGAGCATGTAGCAGCGGTGCACACTGCTACTAACGCTTTGCAAGCATTAGGGAGGGGTTTTGATGTAAACTTTGATACGAGGTTGCTTTATTGTAAAGGAGTTTCAGGGTCTAGGGTAGTTGAGATTGATGAAGAACACCGTAGGGAGCTGTGGTTGTACGAGGATGTGGCTGTTCCCGATGTTTCCAGGGACATTGGATGCTACCAGGAGGCTATGGTGCGTCAGAGTTCTGGGGTCCGCAGTTTTAAAGAGATGGTGGAATACTTTAATGAAAGGGCAAATGTATCAGGGAAGTTTCCTATTGGGAGTTTTAATTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATGAAGCAGCTACAAAAACCTTGTCTTCAGATGGGTTTTACATTCCTCTTGCAAAGGTTCAGCTTCAAAAATCCCACTTAAGGTTGCAAGGAAATGTCAAAAAGGCTGTCCCAGTCAATTGGGACCCACTGTCCTTGGCAAGTTTTATTGAAAATTTTGGGACTCATGTCATTACATCAATAACTATGGGTGGTAAAGATGTTATTTATGTTAAACAACACCATACTTCTCCTTTGTCAAAGTTGGAGATGAAAAACTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAACAGCCAAACAAGTTCAGGGCAAACAAAATCTAAGGATAAGGGTGTTGATCCCTTTTCATTCAATAGTCAAGGGGTTTATCCCCAACCCACGACTGCAACATATCCTATTGGGAAAGAAGTATGTAATGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTGGAACAAAACCACAGTAAATGGTTATCAACTATCAAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACTGATCTCCTTGATGAGATACCTGCCAAGGAGCATTTGACTCGTGCCATTGGTCTTTATCTTGAATATAAACCTCCTATTGAAGAACTTAGATATTTCCTAGAGTTTCAGATTCCTTGTGTATGGGCTCCTTTACAGGACAAGATTCCTGGTCAACAAAGGAAGGAACCTGTATGCCCATCTTTGCAATTCAGCATAATGGGCCAGAAACTTTATGTCAGTCAAGAACAGATTACAGTCGGACGTAGGCCAGTAACTGGCTTACATCTTTGTCTAGAAGGAAGCAAGCAGAATCGGCTGAGTGTTCACGTTCAACACTTGGTATCCCTTCCGAAAATCCTTCACCCATATTGGGACAGCCATGTCGCTATAGGTGCTCCCAAGTGGCAGGGCCCTGAGGAGCAAGACAGCCGGTGGTTTGAGCCTGTTAAGTGGAAGAACTTTTCTCATGTGAGCACGGCACCAATTGAGAACCCTGAAACCTTCATAGGAGACTTCTCTGGTGTCTACATAGTTACTGGAGCACAACTTGGAGTGTGGGATTTCGGATCACGGAATGTATTGTACATGAAGCTCTTATATTCAAGGTTACCTGGATGCACGATCCGAAGATCGCTTTGGGATCACATCCCGAACAAGCCGCCAAAGACTGTGAATGCTGGAAACACCTCCAACCTTGATAACTCAACCCTTAAAGAAAATGCCACAGGCAACAAGTTGGTGAAGTATGTTGACTTGTCTGAGATGACCAAAGGACCCCAAGACCCTCCTGGCCATTGGTTAGTCACTGGTGGAAAGCTTGGTGTTGAAAAAGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTTAATTACTGA 1755 0.4302 MGEHVAAVHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEEHRRELWLYEDVAVPDVSRDIGCYQEAMVRQSSGVRSFKEMVEYFNERANVSGKFPIGSFNSAFSFTGSKHVDEAATKTLSSDGFYIPLAKVQLQKSHLRLQGNVKKAVPVNWDPLSLASFIENFGTHVITSITMGGKDVIYVKQHHTSPLSKLEMKNYIQDIGNQRFSDINSQTSSGQTKSKDKGVDPFSFNSQGVYPQPTTATYPIGKEVCNDVTVIFRRRGGDDLEQNHSKWLSTIKSSPDIIEMTFCPITDLLDEIPAKEHLTRAIGLYLEYKPPIEELRYFLEFQIPCVWAPLQDKIPGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGLHLCLEGSKQNRLSVHVQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVYIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHIPNKPPKTVNAGNTSNLDNSTLKENATGNKLVKYVDLSEMTKGPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01356 584 Pfam MAC/Perforin domain 104 319 IPR020864 -
Gma01g01356 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 584 IPR044663 GO:0006952|GO:0012501|GO:2000031
Gma01g01356 584 SMART MACPF_8 123 321 IPR020864 -
Gma01g01356 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 584 - -
Gma01g01356 584 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 333 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01356 Gma-Chr1 47222375 47229170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01356 - - gmx:100817248 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01356 01 47222375 47229170 Gma01g01356 01 47222375 47229170 ECH