Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01353 ATGTGCACTGGTGCTGAATCTCGAGGAGATATAAATGGTGACCCTGTGATTTCAAAGGTTGGAGGAGACTATGAGGATAGAATGAGAACCATAGAATTGGAAGGTGGAGAAGAAACAGCTTGCAACTGGGGCACATTTGTTCGAGGGCTTCTTCAAGGCATACAGCATCATCTAACTGCCCTTAATCTCCCTAGTCTTTCTGCTTCTGAGTTGAAAGAAGAGTTGCAATCTCTTGCAAAGGTTGCATGTCCCATAATAATGACTAGCCTAATGATGTACTCTCGATCTGCTGTGTCCATGTTGTTCTTGGGTCGGCAAGGGAAAGTAGAGCTAGCAGGAGGCTCACTAGCACTTGGATTTGCCAACATCACAGCCAATTCAGTCCTCAAAGGCCTCACTATGGGAATGGACCCAATTTGTTGCCAAGCATATGGAGCCAAGAGATGGTCAGTTCTCAACCAAACCTTTCTCAGAACTCTGTGTCTCCTCCTACTTGTTGCCATACCAATTTCAATTTTATGGCTAAACATGGAACCAATCCTTCAGATGCTAGGTCAAGACCCTGAAGTCACAAAAGTTGCCCAAGTTTACATGGTCTTCTCTATTCCAGAGTTGCTAGCTCAGGCTCATCTCAATCCATTGAGGTCCTTCCTTAGAACTCAAGGCTTAACCACCCCAGTTACTATAGCTGCTTCTTGTGCAGCACTCTTGCACCTTCCCATCAACTATTTCTTGGCCACATACTTAAACTTGGGAGTAAAGGGTATTGCATTAGCCACTGGTTTGAACTCAATAAACATGACTTTGGGTTTGTTGCTCTATATTTTGTTCTCAAAGAAACCACTGAAGCCTTGGCAAGGTGCTACACTTCTCTCAGCCTTTCATGGATGGAAACCATTGCTGAGTTTGGCATTGCCTAGTTGCATCTCAGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGCTCTTTCTGTGTGGCTTGTTGAGCAATCCACAAGCCACAGTTGCTACCATGGGGATCCTCATTCAAACACTAGGGTTCTTGTATGTGTTCCCATTCTCACTAAGCATAGCCTTGACAACAAGAATTGGTCACTCTTTAGGTGCGGGGCAAGCATCCAAGGCCCAAAGCACAGCCATAATAGGGTTTCTCACAGCATTCACCTTGGGCTTCACTGCCTTCATTTTGCTGTTTCTTGTGAGGAAATCATGGGGGAAACTTTTCACTAATGAGACACAAATTGTTGAGCTGGTCACAACCATACTTCCCATTCTAGGCTTGTGTGAGGTTAGCAATTGGCCTCAAACAGTTTCATGTGGGATTTTGTCAGGCACTGCTAGGCCTTATTTGGGTGCCAGAATAAACTTGTGTGCATTTTATCTAGTTGGATTGCCAGTTTCTGTTTTTGCTACATTCATATATAAATATGAATTGGTGGGTTTGTGGTCTGGAATGGTGGCTGCACAGGCTTCATGTCTTTGTATGATGGTTTACACATTGATTCAAACAGATTGGGGGCAGCAATGTAAGAGGGCAGTGGAGCTAGCTCAGAAAACAACAGAGCGGGAAAATAAAAATGATGATGAGGAAAGTGGGTTGCTTGGTTCTGATCAATGA 1617 0.4422 MCTGAESRGDINGDPVISKVGGDYEDRMRTIELEGGEETACNWGTFVRGLLQGIQHHLTALNLPSLSASELKEELQSLAKVACPIIMTSLMMYSRSAVSMLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRWSVLNQTFLRTLCLLLLVAIPISILWLNMEPILQMLGQDPEVTKVAQVYMVFSIPELLAQAHLNPLRSFLRTQGLTTPVTIAASCAALLHLPINYFLATYLNLGVKGIALATGLNSINMTLGLLLYILFSKKPLKPWQGATLLSAFHGWKPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGQASKAQSTAIIGFLTAFTLGFTAFILLFLVRKSWGKLFTNETQIVELVTTILPILGLCEVSNWPQTVSCGILSGTARPYLGARINLCAFYLVGLPVSVFATFIYKYELVGLWSGMVAAQASCLCMMVYTLIQTDWGQQCKRAVELAQKTTERENKNDDEESGLLGSDQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01353 538 Pfam MatE 306 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma01g01353 538 Pfam MatE 84 244 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma01g01353 538 TIGRFAM matE: MATE efflux family protein 84 482 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma01g01353 538 MobiDBLite consensus disorder prediction 519 538 - -
Gma01g01353 538 CDD MATE_eukaryotic 74 511 IPR045069 GO:0042910|GO:1990961
Gma01g01353 538 PANTHER PROTEIN DETOXIFICATION 53 58 522 - -
Gma01g01353 538 PANTHER MULTIDRUG RESISTANCE PROTEIN 58 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01353 Gma-Chr1 47113673 47119913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01353 K03327 - gmx:106798137 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01353 01 47113673 47119913 Gma01g01353 01 47113673 47119913 ECH
Gma09g02520 09 50471548 50475434 Gma01g01353 01 47113673 47119913 PCT
Gma01g01353 01 47113673 47119913 Gma09g02520 09 50471548 50475434 PCT