Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01346 ATGGAGGAAAGAGTGGGGATTTTGTTACTGATTTTGTTGGGTGCTGCTTGGGCTTGTGATAAAAGAGAGCTAGCAATAATCGGTAAGAAATTAAACAGAAAATCAGATGTCTGTGAACTTTGTGAGGAGTATACTGCTGAGGCACTTGATTATCTAAATGATAAAGAGAACGAGAGAGAGATTATCGATTCCCTTCACAATATTTGCAATCATATTCTCTCTTTCAAACAGCAGTGCATCGAATTGGTGGATCATTATGCCCCACGTTTCTTCTTAGAAATTGCATCAGTTCAGCCTGGAGAACTCTGCAAACAGATCCACATCTGTCAATCTGCAAAGATTTCTTCAGAAGTTGAAGGAAATAGCTGTGACTCTTGCAAAGATACTGTTTCAGCCTTACTGGTTAAGTTGAATGATCCTGATACCAAGCTTGAAATAATGGAGGCACTGTTGAAGGCATGCAATTCTATGGACAAGTTTTCCAAGAAGTGCAAGAGGATGGTTTTTGAGTATGGACCTTTGATTCTTGTCAAGGCAGAGAAGTTCCTGAAAACAGCAGATATATGCACTACATTACATGCCTGCCCTGCTTCCACTGCAGTTAGCAACAAGGAAGCCTCAATCATGGAAGTGCCTTTGATTTCTGACTCTTAA 654 0.4021 MEERVGILLLILLGAAWACDKRELAIIGKKLNRKSDVCELCEEYTAEALDYLNDKENEREIIDSLHNICNHILSFKQQCIELVDHYAPRFFLEIASVQPGELCKQIHICQSAKISSEVEGNSCDSCKDTVSALLVKLNDPDTKLEIMEALLKACNSMDKFSKKCKRMVFEYGPLILVKAEKFLKTADICTTLHACPASTAVSNKEASIMEVPLISDS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01346 217 Pfam Saposin-like type B, region 1 123 157 IPR007856 GO:0006629
Gma01g01346 217 Pfam Saposin-like type B, region 1 36 71 IPR007856 GO:0006629
Gma01g01346 217 PANTHER SAPOSIN-RELATED 1 205 - -
Gma01g01346 217 PANTHER SAPOSIN-RELATED 1 205 - -
Gma01g01346 217 Pfam Saposin-like type B, region 2 162 195 IPR008138 -
Gma01g01346 217 Pfam Saposin-like type B, region 2 77 109 IPR008138 -
Gma01g01346 217 SUPERFAMILY Saposin 120 197 IPR011001 -
Gma01g01346 217 SMART sapb_4 36 109 IPR008139 -
Gma01g01346 217 SMART sapb_4 121 195 IPR008139 -
Gma01g01346 217 Gene3D - 118 198 - -
Gma01g01346 217 Gene3D - 33 110 - -
Gma01g01346 217 PRINTS Saposin signature 120 142 IPR008373 GO:0005764|GO:0006665
Gma01g01346 217 PRINTS Saposin signature 38 58 IPR008373 GO:0005764|GO:0006665
Gma01g01346 217 PRINTS Saposin signature 173 196 IPR008373 GO:0005764|GO:0006665
Gma01g01346 217 SUPERFAMILY Saposin 35 111 IPR011001 -
Gma01g01346 217 ProSiteProfiles Saposin B type domain profile. 119 199 IPR008139 -
Gma01g01346 217 ProSiteProfiles Saposin B type domain profile. 34 113 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01346 Gma-Chr1 46940110 46944487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01346 K12382 - gmx:100527899 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01346 01 46940110 46944487 Gma01g01346 01 46940110 46944487 ECH