Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01343 ATGTGGAGGTGCATCAATGGAAGAATTGCCAGAAGATTTTTATCCACTTCTTCTGCCAGTGCCCGTGGTTGGTGGGACCATGTAAGGCCAGCACCGAAGGACCCCATTGTTCGTGTGAACGAGGCATTTCTAGCTGACCCTTTTCCCCATAAGATCAATCTTGGAATAGGTACTTATAAGGGTGATGATGGCAAAGCTTTCATTCCTCAAAGCGTTCGTGAGGCAGAAACAAAGATTCAGAGATGTAAATTGGAGGAGTCAAACGCTTCCGCAGTCAGATCAAAATTTGTTCAGGAGTGTGTGAGATTAGCATATGGGAATGATTCAAATGTTGTAAGAGAAGGATTGTTTGCAGGAGTTCCAACTCTGTCTGGAACCGGTGCATGTCGGCTTTTTGCTGAATTTCAACGGCATTTCTATCCCGATTCTCAAATGTATCTACCAGATCCTACTTGGTCAAATCACCACAATATATGGAGACAGGCTGAAATTCCAGTCAAAACCTTCCACTACTACCATCCAGATACAAAGGGTTTAGATTTTGCTGCACTCCTCAATGATGTCAAGAATGCACCAGATTGTTCTTTCTTCTTGCTTCATCCGTGTGCCCACAACCCAACTGGTGTTGACCCCACTGAGGAGCAATGGAGAGAAATATCATACCAGTTCCAGGTAAAAAATCATTTCCCATTCTTTGACATGGCTTATCAAGGATTTTCAAGTGGGGATCTTGACAAGGATGCAATAGCACTTCGAATTTTCCTTGAAGATGGGCATTTGATTGGTTGTGCTCAATCTTTTGCAAAGAACATGGGATTATCAGAACATAAAGCTGGTTGTCTTAGTGTTTTGTGCCAGAGTATAAAGCAAGTAGCTGCACTAAAAAGCCAACTGCAGCTGATGTCCCATGCAATGTATAGCAGCATTCCTTTTCAGGGTATTTCACTAGTTACTATGATATTAAGCGAGCCAGATACAGAAGCACTTTGGAGAAAAGAGATAAAGGTCATGGCTAAACGGATTCAAACTATGCGAACTACCTTGCGGCATTGTCTTGAGAACTTGCATTCATCTTTCAATTGGGAGCACATAACTGATCAGGTTGGCATGTTCTGTTTTTCTGGATTAACCCCTGATCAGGTTCAACAGATGGAGAAGCTGTTCCATATATACATGACCCCTGATGGAAGAATGAGCATGTCAGGTGTGACCTCTAGCAATGTGGATTACTTGGCAAATGCAATACATCAGGTGACCAGAATCGATGAGGAAGCCCTAAGATCATGTTACGTATAG 1296 0.4267 MWRCINGRIARRFLSTSSASARGWWDHVRPAPKDPIVRVNEAFLADPFPHKINLGIGTYKGDDGKAFIPQSVREAETKIQRCKLEESNASAVRSKFVQECVRLAYGNDSNVVREGLFAGVPTLSGTGACRLFAEFQRHFYPDSQMYLPDPTWSNHHNIWRQAEIPVKTFHYYHPDTKGLDFAALLNDVKNAPDCSFFLLHPCAHNPTGVDPTEEQWREISYQFQVKNHFPFFDMAYQGFSSGDLDKDAIALRIFLEDGHLIGCAQSFAKNMGLSEHKAGCLSVLCQSIKQVAALKSQLQLMSHAMYSSIPFQGISLVTMILSEPDTEALWRKEIKVMAKRIQTMRTTLRHCLENLHSSFNWEHITDQVGMFCFSGLTPDQVQQMEKLFHIYMTPDGRMSMSGVTSSNVDYLANAIHQVTRIDEEALRSCYV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01343 431 SUPERFAMILY PLP-dependent transferases 24 420 IPR015424 -
Gma01g01343 431 Gene3D - 83 323 IPR015421 GO:0003824
Gma01g01343 431 PANTHER ASPARTATE AMINOTRANSFERASE 12 423 IPR000796 GO:0006520|GO:0008483
Gma01g01343 431 PRINTS Aspartate aminotransferase signature 197 216 IPR000796 GO:0006520|GO:0008483
Gma01g01343 431 PRINTS Aspartate aminotransferase signature 228 240 IPR000796 GO:0006520|GO:0008483
Gma01g01343 431 PRINTS Aspartate aminotransferase signature 296 321 IPR000796 GO:0006520|GO:0008483
Gma01g01343 431 PRINTS Aspartate aminotransferase signature 364 382 IPR000796 GO:0006520|GO:0008483
Gma01g01343 431 PANTHER ASPARTATE AMINOTRANSFERASE 12 423 - -
Gma01g01343 431 CDD AAT_like 120 417 - -
Gma01g01343 431 Gene3D Aspartate Aminotransferase, domain 1 28 415 IPR015422 GO:0003824
Gma01g01343 431 Pfam Aminotransferase class I and II 50 415 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01343 Gma-Chr1 46861308 46864968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01343 K14455 - gmx:100814593 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01343 01 46861308 46864968 Gma01g01343 01 46861308 46864968 ECH