Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01331 ATGGTTCTGGCGTGCATGGTCGTGATGGTTGCACACAACACTGTCCAAGGCATCAGGTGTGGCCAGGTTCAGGGTAACCTAGCACCGTGCCTAGGGTTTCTCCAGAACGGTGGAGCTGTTTCCAGAGGATGCTGCAACGGGGTCAGGAGTATTGTGAACAATGCCAGGACCACTGGTGATCGCCGTGCTGTTTGCAACTGCTTGAAGATAGCTGCTGGTGCTGTTCGGAAGCTCAACCCTTACAATGCTCAGGCTCTCCCCGGGAAATGTGGGGTCAACATACCCTACAAGATCAGCACCTCCACCAACTGTAACAGGTATGTGTCTATTGAGATAGAAATAAGTACACAACCTAACAACCTAGAGTAA 369 0.5122 MVLACMVVMVAHNTVQGIRCGQVQGNLAPCLGFLQNGGAVSRGCCNGVRSIVNNARTTGDRRAVCNCLKIAAGAVRKLNPYNAQALPGKCGVNIPYKISTSTNCNRYVSIEIEISTQPNNLE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01331 122 SMART aai_6 20 104 IPR016140 -
Gma01g01331 122 CDD nsLTP1 18 105 - -
Gma01g01331 122 Pfam Protease inhibitor/seed storage/LTP family 20 104 IPR016140 -
Gma01g01331 122 PRINTS Plant phospholipid transfer protein signature 60 75 IPR000528 GO:0006869|GO:0008289
Gma01g01331 122 PRINTS Plant phospholipid transfer protein signature 77 94 IPR000528 GO:0006869|GO:0008289
Gma01g01331 122 PRINTS Plant phospholipid transfer protein signature 95 106 IPR000528 GO:0006869|GO:0008289
Gma01g01331 122 PRINTS Plant phospholipid transfer protein signature 19 35 IPR000528 GO:0006869|GO:0008289
Gma01g01331 122 PRINTS Plant phospholipid transfer protein signature 39 53 IPR000528 GO:0006869|GO:0008289
Gma01g01331 122 PANTHER - 1 106 IPR000528 GO:0006869|GO:0008289
Gma01g01331 122 Gene3D - 17 108 IPR036312 -
Gma01g01331 122 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 19 107 IPR036312 -
Gma01g01331 122 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01331 Gma-Chr1 46651579 46651947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01331 6 105 Acyl Lipid Metabolism Gene Families AT5G59320 47.000 2.67e-28 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01331 - - gmx:100776812 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01950 18 52719564 52721181 Gma01g01331 01 46651579 46651947 PCT
Gma01g01331 01 46651579 46651947 Gma18g01950 18 52719564 52721181 PCT