Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01327 ATGACAGTATTCTTAGCCACGAGGCTCGTGTTTCGGAGATCCCCGCCGCTTCTCTGGCGGCGCAGCTTTTCTCGGGCGGCGGTAGAGGCCGAAAAGGACACTGTTGCCGTGCCGTCGCTTCCGTTGTTCGATTACTCTCCGCCTCCGTATGCGGGGCCCACCGCTGACGAGATTCTGGCAAAGCGCAGGGAGTATCTGAGTCCTTCCATCTTGCACTTCTACAAGAATCCCGTGAACATAGTGGAGGGTAAGAAGCAGTACCTGTTTGACGAGAAGGGGAGAAGGTACGTGGATGCGTTTGGAGGGATTGCTACGGTGTGCTGCGGGCACTGTCACCCTGATGTGGTCGAAGCCATAGTCAACCAAACCAAAAAGTTGCAGCACTCCACAGTTCTCTACCTTAACAACGCCATCGCCGATTTCGCTCAAGCTTTGACTTCCAAGCTTCCCGGTAATCTCAAGGTGGTGTTTTTCACAAACTCTGGAACAGAAGCAAACGAATTGGCGATACTGATTGCAAGGTTATACACAGGGTGTCATGACATAATATCTCTAAGGAATGCTTATCATGGTAATGCAGCTGGGACAATGGGAGCTACAGCTCAAAGCATCTGGAAATTTAATGTAGTACAGAGTGGTGTTCATCATGCAGTGAATCCAGACCCTTATAGAGGCATTTTCGGTTCTGATGGAGAGAAGTATGCAAGAGATGTACAAGATATCATTAACTTCGGAACTTCTGGAAATGTTGCAGCCTTCATTTCTGAAGCCATACAGGGAGTGGGGGGTATCATTGAATTGGCTCCTGGTTACTTGCCAGCTGTGTACAATACCATTAAAAAAGCAGGAGGACTTTTCATAGCTGATGAGGTTCAGGCTGGCTTTGGTCGCACTGGTAGCCATTTCTGGGGATTTGAGGCCCACAATGTTGTTCCTGACATAGTGACAATGGCTAAGGGCATTGGAAATGGCATTCCTCTTGGTGCTGTTGTAACTACTCCAGAGATCGCAGAGGTCTTAACCCGCCGGAGCTACTTTAACACATTTGGTGGCAACCCTGTTTGTACTGCTGCAGGGTTGGCTGTTTTAAAAGTAATAGAGAAAGAGCAGCTTCAACAAAACGCGTTTGTGGTTGGATCCTATTTGAAAGAAAGGCTCACTGCCCTCAAGGACAAATATGAATTAATTGGTGATGTGAGGGGAAGAGGCCTAATGCTAGGAGTTGAACTTGTCACTGATCGTGAACTTAAAATTCCAGCAAAAGGTGAAACGCTGCATGTAATGGACCAAATGAAAGAATTAGGAGTACTTATTGGTAAGGGTGGTTACTATGGAAATGTCTTCAGAATTACACCCCCGTTGTGTTTCACCAAAGAAGATGCAGACTTTGTAGCAGACGCAATGGACTTGACCTTGTCTAGAATGTGA 1428 0.4713 MTVFLATRLVFRRSPPLLWRRSFSRAAVEAEKDTVAVPSLPLFDYSPPPYAGPTADEILAKRREYLSPSILHFYKNPVNIVEGKKQYLFDEKGRRYVDAFGGIATVCCGHCHPDVVEAIVNQTKKLQHSTVLYLNNAIADFAQALTSKLPGNLKVVFFTNSGTEANELAILIARLYTGCHDIISLRNAYHGNAAGTMGATAQSIWKFNVVQSGVHHAVNPDPYRGIFGSDGEKYARDVQDIINFGTSGNVAAFISEAIQGVGGIIELAPGYLPAVYNTIKKAGGLFIADEVQAGFGRTGSHFWGFEAHNVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRSYFNTFGGNPVCTAAGLAVLKVIEKEQLQQNAFVVGSYLKERLTALKDKYELIGDVRGRGLMLGVELVTDRELKIPAKGETLHVMDQMKELGVLIGKGGYYGNVFRITPPLCFTKEDADFVADAMDLTLSRM 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01327 475 PANTHER ALANINE--GLYOXYLATE AMINOTRANSFERASE 2 HOMOLOG 3, MITOCHONDRIAL-LIKE ISOFORM X1 24 475 - -
Gma01g01327 475 SUPERFAMILY PLP-dependent transferases 69 472 IPR015424 -
Gma01g01327 475 CDD OAT_like 77 469 IPR005814 GO:0008483|GO:0030170
Gma01g01327 475 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 286 324 IPR005814 GO:0008483|GO:0030170
Gma01g01327 475 Gene3D Aspartate Aminotransferase, domain 1 77 470 IPR015422 GO:0003824
Gma01g01327 475 Gene3D - 112 369 IPR015421 GO:0003824
Gma01g01327 475 PIRSF Transaminase_4ab_Lys_Orn 176 475 IPR005814 GO:0008483|GO:0030170
Gma01g01327 475 PIRSF Transaminase_4ab_Lys_Orn 46 180 IPR005814 GO:0008483|GO:0030170
Gma01g01327 475 Pfam Aminotransferase class-III 77 469 IPR005814 GO:0008483|GO:0030170
Gma01g01327 475 PANTHER - 24 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01327 Gma-Chr1 46501495 46508595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01327 K00827 - gmx:100170733 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01327 01 46501495 46508595 Gma01g01327 01 46501495 46508595 ECH
Gma03g01110 03 36173390 36174478 Gma01g01327 01 46501495 46508595 GST