Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01324 ATGCAAAACCAACAACCCTCCGGTATCATCAACCCTAAGTATTGTGCTCCATATAATGTCGACCTAGCAATTGTGAGAAAGGTCCTGGCATTAACTGATAGCTTTACCGTCACCGATGTCAATGGCCAAATTGTTTTCAGCCTTAAGGCCTCTCTCATGACCCTCCATGACCACCGTGTCTTGCTTGACGCCGCCGGAGAACCCGTCGTCACACTACGCCGGAAGTTAATGACTGCTCATGATCGGTGGGAAGTTTTCCGTGGTGGAAGCACGGAGCCGAAAGATTTGATCTTTAGTGTGAAGCGATCGTCCTTTTTCCAACTGAAGACAAAATTAGATGTGTTCTTAGCCAATAATACTAAAGAAGAAGTATGTGACTTTAAGGTGAAAGGAAGTTGGTTCGAACGATCTTGTGTTGTTTATGCTGGTGAATCTCTGAACATTGTTGCCCAGATGCATAAGAAGCACACTGTTCAAAGCATTGCGTTTGGGAAAGACAATTTCATGGTTACAGTGTATCCAAATATTGACTCCGCATTCATAGCGACACTGATTCTGATTATTGACGAAATTAACAAAGACATGAAAAATCAATGA 597 0.4288 MQNQQPSGIINPKYCAPYNVDLAIVRKVLALTDSFTVTDVNGQIVFSLKASLMTLHDHRVLLDAAGEPVVTLRRKLMTAHDRWEVFRGGSTEPKDLIFSVKRSSFFQLKTKLDVFLANNTKEEVCDFKVKGSWFERSCVVYAGESLNIVAQMHKKHTVQSIAFGKDNFMVTVYPNIDSAFIATLILIIDEINKDMKNQ 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01324 198 PANTHER - 4 196 IPR007612 -
Gma01g01324 198 PANTHER TUBBY C 2 PROTEIN 4 196 - -
Gma01g01324 198 SUPERFAMILY Tubby C-terminal domain-like 9 192 IPR025659 -
Gma01g01324 198 Gene3D - 7 197 IPR038595 -
Gma01g01324 198 Pfam LURP-one-related 11 187 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01324 Gma-Chr1 46463822 46466167 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01324 - - gmx:100527184 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01324 01 46463822 46466167 Gma01g01324 01 46463822 46466167 ECH
Gma18g01937 18 52506581 52510167 Gma01g01324 01 46463822 46466167 PCT
Gma01g01324 01 46463822 46466167 Gma18g01937 18 52506581 52510167 PCT